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L3_133_000M1_scaffold_738

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_738_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..565
DNA (564bp) protein (188aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T465_ROSHA
GDP-mannose 4,6-dehydratase
L3_133_000M1_scaffold_738_2
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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748..3069
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQ88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72806.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
AAA ATPase
L3_133_000M1_scaffold_738_3

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3129..3818
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TNM2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74767.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_133_000M1_scaffold_738_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3901..4836
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036C0424
Uncharacterized protein {ECO:0000313|EMBL:EHI60263.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
conserved hypothetical protein (putative transposase or invertase)
L3_133_000M1_scaffold_738_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5031..5498
DNA (468bp) protein (156aa)
Predicted membrane protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM93_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK92928.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_133_000M1_scaffold_738_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5508..6419
DNA (912bp) protein (304aa)
Transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T485_ROSHA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEN97530.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6416..6553)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T484_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97529.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6746..6997
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T483_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97528.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7130..8167
DNA (1038bp) protein (346aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Roseburia intestinalis RepID=D4KME3_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL08045.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_133_000M1_scaffold_738_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8187..9131
DNA (945bp) protein (315aa)
Glycosyltransferase-like protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T482_ROSHA
glycosyltransferase-like protein
Glycosyltransferase-like protein {ECO:0000313|EMBL:AEN97527.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9245..10354
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T481_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97526.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_12
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10375..10593
DNA (219bp) protein (73aa)
Acyl carrier protein n=7 Tax=Clostridium thermocellum RepID=A3DHK0_CLOTH
phosphopantetheine-binding protein
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_133_000M1_scaffold_738_13
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10595..12241
DNA (1647bp) protein (549aa)
FkbH like protein n=7 Tax=Clostridium thermocellum RepID=A3DHJ9_CLOTH
FkbH-like protein
FkbH like protein {ECO:0000313|EMBL:ABN53428.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_133_000M1_scaffold_738_14
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12310..12873
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00035D6003
O-acetyltransferase, anthrose biosynthesis {ECO:0000313|EMBL:CDL92181.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
galactoside O-acetyltransferase
L3_133_000M1_scaffold_738_15
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12870..13262)
DNA (393bp) protein (131aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Glyoxalase/bleomycin resistance protein/dioxygenase n=7 Tax=Clostridium thermocellum RepID=A3DHJ8_CLOTH
Lactoylglutathione lyase {ECO:0000313|EMBL:CEN39391.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
L3_133_000M1_scaffold_738_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13301..14242)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T480_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97525.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14283..15335)
DNA (1053bp) protein (351aa)
Acyltransferase family n=3 Tax=Roseburia RepID=D4KME4_9FIRM
Acyltransferase family.
Acyltransferase family {ECO:0000313|EMBL:CBL08046.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_133_000M1_scaffold_738_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15350..16387)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G7A1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54128.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_133_000M1_scaffold_738_19

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16546..17385
DNA (840bp) protein (280aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TQG9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC69854.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Glycosyl transferase family 2
L3_133_000M1_scaffold_738_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17535..18647
DNA (1113bp) protein (371aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T479_ROSHA
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AEN97524.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18644..19459
DNA (816bp) protein (272aa)
Glycosyl transferase family 11 n=3 Tax=Roseburia RepID=D4KMF0_9FIRM
Glycosyl transferase family 11.
Glycosyl transferase family 11 {ECO:0000313|EMBL:CDA54116.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_133_000M1_scaffold_738_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19456..21192
DNA (1737bp) protein (579aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AT07_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA54115.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L3_133_000M1_scaffold_738_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21212..22033
DNA (822bp) protein (274aa)
Nodulation protein Z (NodZ) n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AQ10_9FIRM
Nodulation protein Z (NodZ) {ECO:0000313|EMBL:CDA54113.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Nodulation protein Z (NodZ).
L3_133_000M1_scaffold_738_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22038..22775
DNA (738bp) protein (246aa)
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family (EC:2.4.1.187 2.4.1.-)
Bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family n=2 Tax=Roseburia RepID=D4KMF3_9FIRM
Bacterial polymer biosynthesis proteins WecB/TagA/CpsF family {ECO:0000313|EMBL:CDA54110.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_133_000M1_scaffold_738_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22800..24668
DNA (1869bp) protein (623aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CBL12621.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CBL12621.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=3 Tax=Roseburia RepID=D4KZ31_9FIRM
L3_133_000M1_scaffold_738_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24677..25702
DNA (1026bp) protein (342aa)
Acyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G789_9FIRM
Acyltransferase {ECO:0000313|EMBL:EEV02293.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Fucose 4-O-acetylase and related acetyltransferases
L3_133_000M1_scaffold_738_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25707..26759
DNA (1053bp) protein (351aa)
Putative transporter n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T467_ROSHA
putative transporter
Putative transporter {ECO:0000313|EMBL:AEN97512.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_738_28
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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26816..28354
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZXA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD45711.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L3_133_000M1_scaffold_738_29
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28414..29370
DNA (957bp) protein (319aa)
Glycosyltransferase group 2 family protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXX6_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDF42326.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Glycosyltransferases involved in cell wall biogenesis
L3_133_000M1_scaffold_738_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29371..30324)
DNA (954bp) protein (318aa)
Transcriptional regulator, AraC family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T466_ROSHA
AraC family transcriptional regulator
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:AEN97511.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying items 1-30 of 31 in total

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