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L3_133_000M1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 142 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_13_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..606)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CKA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25571.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000M1_scaffold_13_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

755..901
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BFE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76849.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000M1_scaffold_13_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

885..1814
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CX42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72450.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_133_000M1_scaffold_13_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

1811..2746
DNA (936bp) protein (312aa)
Redoxin family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0Z8_9FIRM
Redoxin family protein {ECO:0000313|EMBL:CCX72449.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
AhpC/TSA family.
L3_133_000M1_scaffold_13_5
unknown

Not on your lists

3445..3642
DNA (198bp) protein (66aa)

This feature has no annotations

L3_133_000M1_scaffold_13_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

4513..4704
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47708.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_13_7
unknown

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5191..5436
DNA (246bp) protein (82aa)

This feature has no annotations

L3_133_000M1_scaffold_13_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

5569..6564
DNA (996bp) protein (332aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYU6_9FIRM
L3_133_000M1_scaffold_13_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6674..7366
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GN08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26858.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_13_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

7381..8382
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72975.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_133_000M1_scaffold_13_11
unknown

Not on your lists

8769..9230
DNA (462bp) protein (154aa)

This feature has no annotations

L3_133_000M1_scaffold_13_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9235..10386
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26285.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_133_000M1_scaffold_13_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10383..11327
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26284.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_13_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11324..13378
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26283.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_13_15
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13435..14100)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EXL2_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99582.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_133_000M1_scaffold_13_16
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14301..15149
DNA (849bp) protein (283aa)
Conserved repeat protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WDX0_9FIRM
Conserved repeat protein {ECO:0000313|EMBL:CDD05004.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
conserved repeat domain
L3_133_000M1_scaffold_13_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15324..17495
DNA (2172bp) protein (724aa)
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQJ9_9FIRM
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:CDB26705.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated helicase Cas3
L3_133_000M1_scaffold_13_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17564..18226
DNA (663bp) protein (221aa)
CRISPR-associated protein Cas5 Dvulg subtype n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY93_9FIRM
CRISPR-associated protein Cas5 Dvulg subtype {ECO:0000313|EMBL:CDB26704.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated protein Cas5 family
L3_133_000M1_scaffold_13_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18223..19959
DNA (1737bp) protein (579aa)
CRISPR-associated protein Csd1 family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GML8_9FIRM
CRISPR-associated protein Csd1 family {ECO:0000313|EMBL:CDB26703.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated protein, Csd1 family
L3_133_000M1_scaffold_13_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19952..20842
DNA (891bp) protein (297aa)
CRISPR-associated protein Csd2 family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL59_9FIRM
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:CDB26702.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated protein, Csd2 family
L3_133_000M1_scaffold_13_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20839..21504
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26701.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated protein Cas4
L3_133_000M1_scaffold_13_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21501..22532
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQJ4_9FIRM
CRISPR-associated protein Cas1
L3_133_000M1_scaffold_13_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22542..22832
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY89_9FIRM
CRISPR-associated endoribonuclease Cas2
L3_133_000M1_scaffold_13_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24933..25526)
DNA (594bp) protein (198aa)
CotJC protein n=2 Tax=Oscillibacter RepID=U2QS35_9FIRM
CotJC protein {ECO:0000313|EMBL:ERK65745.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
manganese containing catalase
L3_133_000M1_scaffold_13_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25526..26056)
DNA (531bp) protein (177aa)
CotJB protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2C7_9FIRM
CotJB protein {ECO:0000313|EMBL:CDB27616.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CotJB protein
L3_133_000M1_scaffold_13_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26185..26907
DNA (723bp) protein (241aa)
putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HP00_9FIRM
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB27617.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_133_000M1_scaffold_13_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26909..28270
DNA (1362bp) protein (454aa)
DNA repair protein radA n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQC8_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
radA; DNA repair protein RadA
L3_133_000M1_scaffold_13_28
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

28286..29014
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FVG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07659.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L3_133_000M1_scaffold_13_29
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29076..30395)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FE75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12017.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L3_133_000M1_scaffold_13_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30570..32051
DNA (1482bp) protein (494aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Stage IV sporulation protein A n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTB0_9FIRM
spoIVA; stage IV sporulation protein A
Displaying items 1-30 of 142 in total

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