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L3_133_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_50_1
unknown

Not on your lists

104..295
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Bacillus acidiproducens RepID=UPI00037F0ADC
L3_133_000M1_scaffold_50_2
unknown

Not on your lists

comp(282..476)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_133_000M1_scaffold_50_3
unknown

Not on your lists

comp(812..1048)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_133_000M1_scaffold_50_4
unknown

Not on your lists

1309..1653
DNA (345bp) protein (115aa)

This feature has no annotations

L3_133_000M1_scaffold_50_5
unknown

Not on your lists

comp(1501..1821)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_133_000M1_scaffold_50_6
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1896..2285
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036B2CF3
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEU12320.1}; Uncharacterized protein {ECO:0000313|EMBL:ADO36249.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000M1_scaffold_50_7
unknown

Not on your lists

2566..2958
DNA (393bp) protein (131aa)

This feature has no annotations

L3_133_000M1_scaffold_50_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2960..3343
DNA (384bp) protein (128aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P148_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC03692.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Helix-turn-helix.
L3_133_000M1_scaffold_50_9
unknown

Not on your lists

3359..3574
DNA (216bp) protein (72aa)

This feature has no annotations

L3_133_000M1_scaffold_50_10
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3630..4025)
DNA (396bp) protein (132aa)
Toxin-antitoxin system, antitoxin component, HicB family n=2 Tax=Desulfitobacterium hafniense RepID=G9XNM3_DESHA
hypothetical protein
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EHL06723.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
L3_133_000M1_scaffold_50_11
Capnocytophaga sp. oral taxon 412, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4118..4339)
DNA (222bp) protein (74aa)
toxin HicA n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C56
YcfA-like protein {ECO:0000313|EMBL:EIW90805.1}; TaxID=1125721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 412 str. F0487.;"
hypothetical protein
L3_133_000M1_scaffold_50_12
unknown

Not on your lists

comp(4395..4499)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_133_000M1_scaffold_50_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(4501..4689)
DNA (189bp) protein (63aa)
CI-like repressor n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVU4_9FIRM
CI-like repressor {ECO:0000313|EMBL:CCX46064.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
transcriptional regulator of molybdate metabolism
L3_133_000M1_scaffold_50_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4858..5883
DNA (1026bp) protein (342aa)
Site-specific recombinase, phage integrase family n=2 Tax=Oscillibacter RepID=U2QJL8_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK63095.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Phage integrase family.
L3_133_000M1_scaffold_50_15
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5978..7018)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E7X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98800.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_133_000M1_scaffold_50_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

7202..9184
DNA (1983bp) protein (661aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9D6_9FIRM
DNA gyrase subunit B {ECO:0000313|EMBL:CCX73437.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_133_000M1_scaffold_50_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


9881..12121
DNA (2241bp) protein (747aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZT9_9FIRM
DNA gyrase subunit A {ECO:0000313|EMBL:CCX73438.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_133_000M1_scaffold_50_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

12155..13018
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73439.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_133_000M1_scaffold_50_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13035..13706
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26409.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_50_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(14123..15079)
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DG33_9FIRM
L3_133_000M1_scaffold_50_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(15083..15955)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81762.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_133_000M1_scaffold_50_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(16076..17443)
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7S5_9FIRM
mnmE; tRNA modification GTPase MnmE
L3_133_000M1_scaffold_50_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

18058..18249
DNA (192bp) protein (64aa)
Ferredoxin n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6H8_9FIRM
Ferredoxin {ECO:0000313|EMBL:CCX72457.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ferredoxin
L3_133_000M1_scaffold_50_24
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


18426..18692
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Firmicutes RepID=R6DB73_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
SSU ribosomal protein S15P
L3_133_000M1_scaffold_50_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18880..21030
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHQ6_9FIRM
L3_133_000M1_scaffold_50_26
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21103..21309)
DNA (207bp) protein (69aa)
XRE family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D55
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCY67045.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
helix-turn-helix domain-containing protein
L3_133_000M1_scaffold_50_27
Bifidobacterium thermophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21393..21905
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N8E6_SLAHD
Integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:KFJ05894.1}; TaxID=33905 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermophilum.;"
L3_133_000M1_scaffold_50_28
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21918..22295
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQ79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80980.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L3_133_000M1_scaffold_50_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22921..24078)
DNA (1158bp) protein (386aa)
Site-specific recombinase, phage integrase family n=2 Tax=Oscillibacter RepID=U2QI73_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK66214.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative site-specific recombinase
L3_133_000M1_scaffold_50_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(24126..25595)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43536.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
osmoregulated proline transporter
Displaying items 1-30 of 100 in total

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