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L3_133_000M1_scaffold_894

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_894_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(128..937)
DNA (810bp) protein (270aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=2 Tax=Oscillibacter RepID=U2RUS3_9FIRM
L3_133_000M1_scaffold_894_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(968..1486)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYX9_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98773.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_133_000M1_scaffold_894_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2179..2814
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Oscillibacter RepID=U2QSP1_9FIRM
L3_133_000M1_scaffold_894_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2922..3719
DNA (798bp) protein (266aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV24_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDB25116.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_133_000M1_scaffold_894_5
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3716..4894
DNA (1179bp) protein (393aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TIE1_9FIRM
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CDC69484.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative cytosine permease
L3_133_000M1_scaffold_894_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5103..7040)
DNA (1938bp) protein (646aa)
Metallo-beta-lactamase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KF24_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERJ97111.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Alkyl sulfatase and related hydrolases
L3_133_000M1_scaffold_894_7
Fusobacterium periodonticum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(7037..8068)
DNA (1032bp) protein (344aa)
NMT1/THI5 like protein n=1 Tax=Fusobacterium periodonticum 1_1_41FAA RepID=D6LGE2_9FUSO
NMT1/THI5 like protein {ECO:0000313|EMBL:EFG29227.2}; TaxID=469621 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodonticum 1_1_41FAA.;"
NMT1/THI5 like domain-containing protein
L3_133_000M1_scaffold_894_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8195..8953)
DNA (759bp) protein (253aa)
Putative aliphatic sulfonates transport permease protein SsuC n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5V6_9FIRM
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:ERJ97114.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L3_133_000M1_scaffold_894_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8950..9705)
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KF28_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ97116.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter
L3_133_000M1_scaffold_894_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(10094..10528)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82333.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_133_000M1_scaffold_894_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10568..11134)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUB9_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
efp; elongation factor P
L3_133_000M1_scaffold_894_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11275..11772)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25336.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_894_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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11861..12613
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72865.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_133_000M1_scaffold_894_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12766..12951)
DNA (186bp) protein (62aa)
30S ribosomal protein S21 n=2 Tax=environmental samples RepID=R5D261_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsU; 30S ribosomal protein S21
L3_133_000M1_scaffold_894_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(13110..15539)
DNA (2430bp) protein (810aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0W9_9FIRM
L3_133_000M1_scaffold_894_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15969..16505
DNA (537bp) protein (179aa)
ADP-ribose pyrophosphatase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZA5_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDB26531.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
NUDIX hydrolase
L3_133_000M1_scaffold_894_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(16776..17393)
DNA (618bp) protein (206aa)
Putative stage II sporulation protein R n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZ16_9FIRM
Putative stage II sporulation protein R {ECO:0000313|EMBL:CCX73155.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative stage II sporulation protein R
L3_133_000M1_scaffold_894_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17462..18643)
DNA (1182bp) protein (394aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0Y4_9FIRM
L3_133_000M1_scaffold_894_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(18746..20029)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DA13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72706.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_133_000M1_scaffold_894_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20243..20452
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25215.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_894_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(20904..21317)
DNA (414bp) protein (138aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCH4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX73581.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative repressor
L3_133_000M1_scaffold_894_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21557..22429
DNA (873bp) protein (291aa)
Putative ribonuclease n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJE8_9FIRM
Putative ribonuclease {ECO:0000313|EMBL:CDB25588.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ribonuclease
L3_133_000M1_scaffold_894_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22426..23787
DNA (1362bp) protein (454aa)
Potassium transporter peripheral membrane component n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHY4_9FIRM
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:CDB25592.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
trk system potassium uptake protein TrkA
L3_133_000M1_scaffold_894_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23858..24496)
DNA (639bp) protein (213aa)
DegV family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMX5_9FIRM
DegV family protein {ECO:0000313|EMBL:CDB25795.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_894_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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24641..25318
DNA (678bp) protein (226aa)
Lysophospholipase L1-like esterase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0F5_9FIRM
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:CCX73675.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
lipase/acylhydrolase
L3_133_000M1_scaffold_894_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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25341..26192
DNA (852bp) protein (284aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCP9_9FIRM
DegV family protein {ECO:0000313|EMBL:CCX73676.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
degV family protein
L3_133_000M1_scaffold_894_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26586..27104
DNA (519bp) protein (173aa)
proC1; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Pyrroline-5-carboxylate reductase ProC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLU7_CLOSA
L3_133_000M1_scaffold_894_28
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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27155..27478
DNA (324bp) protein (108aa)
UPF0345 protein ABED_0953 n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HMU7_9PROT
hypothetical protein
UPF0345 protein Abu_1007 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
L3_133_000M1_scaffold_894_29
unknown

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comp(27580..27681)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 29 items

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