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L3_133_000M1_scaffold_1536

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1536_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..753)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67226.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_133_000M1_scaffold_1536_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(925..1410)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TWF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74149.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_133_000M1_scaffold_1536_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1948..3261)
DNA (1314bp) protein (438aa)
Transporter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GI25_EUBLK
hypothetical protein
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000M1_scaffold_1536_4
unknown

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comp(3306..3407)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_133_000M1_scaffold_1536_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3909..4670
DNA (762bp) protein (254aa)
IclR helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2Q1B5_9FIRM
IclR helix-turn-helix protein {ECO:0000313|EMBL:ERK66417.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator
L3_133_000M1_scaffold_1536_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(4856..5920)
DNA (1065bp) protein (355aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S3A7_9FIRM
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:CCZ45374.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_133_000M1_scaffold_1536_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5952..6899)
DNA (948bp) protein (316aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RX49_9FIRM
L-lactate dehydrogenase {ECO:0000313|EMBL:CCZ45373.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_133_000M1_scaffold_1536_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(6949..8487)
DNA (1539bp) protein (513aa)
Putative transporter n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SK89_9FIRM
Putative transporter {ECO:0000313|EMBL:CCZ45372.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative transporter
L3_133_000M1_scaffold_1536_9
unknown

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comp(8622..8831)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_133_000M1_scaffold_1536_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

9191..10276
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGQ3_9FIRM
L3_133_000M1_scaffold_1536_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

10345..11250
DNA (906bp) protein (302aa)
Oxidoreductase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D499_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CCX75045.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
oxidoreductase
L3_133_000M1_scaffold_1536_12
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(11399..12640)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EDH9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG65322.1}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
L3_133_000M1_scaffold_1536_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12649..14310)
DNA (1662bp) protein (554aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MFL3_9FIRM
L3_133_000M1_scaffold_1536_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14351..15373)
DNA (1023bp) protein (341aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Ketol-acid reductoisomerase n=3 Tax=Clostridiales RepID=G9YNN5_9FIRM
ketol-acid reductoisomerase
L3_133_000M1_scaffold_1536_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15418..15972)
DNA (555bp) protein (185aa)
ilvH; acetolactate synthase small subunit IlvH (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IG72_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDE50461.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_133_000M1_scaffold_1536_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(15991..17709)
DNA (1719bp) protein (573aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Acetolactate synthase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDL5_9FIRM
acetolactate synthase
L3_133_000M1_scaffold_1536_17
unknown

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comp(17839..18090)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_133_000M1_scaffold_1536_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(18494..18856)
DNA (363bp) protein (121aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D8A5_9FIRM
Displaying 18 items

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