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L3_133_061G1_scaffold_157

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Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_061G1_scaffold_157_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(333..899)
DNA (567bp) protein (189aa)
PduO protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQJ3_9CLOT
PduO protein {ECO:0000313|EMBL:EEA81733.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP:cob(I)alamin adenosyltransferase
L3_133_061G1_scaffold_157_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(914..1243)
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B0W1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66957.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_133_061G1_scaffold_157_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1240..3054)
DNA (1815bp) protein (605aa)
Glycerol dehydratase reactivation factor, large subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z327_9CLOT
Glycerol dehydratase reactivation factor, large subunit {ECO:0000313|EMBL:EGB91459.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
diol/glycerol dehydratase reactivating factor large subunit
L3_133_061G1_scaffold_157_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3051..3443)
DNA (393bp) protein (131aa)
Glycerol dehydratase, small subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z328_9CLOT
Glycerol dehydratase, small subunit {ECO:0000313|EMBL:EGB91460.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
dehydratase small subunit
L3_133_061G1_scaffold_157_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3445..4122)
DNA (678bp) protein (226aa)
Glycerol dehydratase, medium subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z329_9CLOT
Glycerol dehydratase, medium subunit {ECO:0000313|EMBL:EGB91461.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Dehydratase medium subunit
L3_133_061G1_scaffold_157_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4134..5798)
DNA (1665bp) protein (555aa)
Glycerol dehydratase large subunit n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMD1_9FIRM
Glycerol dehydratase large subunit {ECO:0000313|EMBL:EGN38309.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
dehydratase large subunit
L3_133_061G1_scaffold_157_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6006..6722)
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQJ1_9CLOT
L3_133_061G1_scaffold_157_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6737..7285)
DNA (549bp) protein (183aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Fumarate hydratase, beta subunit n=2 Tax=Clostridium RepID=B6FQJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22316.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_133_061G1_scaffold_157_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7295..8140)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Fumarate hydratase n=2 Tax=Clostridium RepID=B6FQI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22317.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_133_061G1_scaffold_157_10
unknown

Not on your lists

comp(8258..8947)
DNA (690bp) protein (230aa)

This feature has no annotations

L3_133_061G1_scaffold_157_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8980..10419)
DNA (1440bp) protein (480aa)
Putative bacteriocin ABC transporter, bacteriocin-binding protein n=2 Tax=Clostridium botulinum RepID=B1Q7Y4_CLOBO
putative bacteriocin ABC transporter, bacteriocin-binding protein
Putative bacteriocin ABC transporter, bacteriocin-binding protein {ECO:0000313|EMBL:ABS42941.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L3_133_061G1_scaffold_157_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10424..12589)
DNA (2166bp) protein (722aa)
Putative bacteriocin ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU03_CLOPS
bacteriocin ABC transporter ATP-binding/permease
Putative bacteriocin ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:ABG85564.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_133_061G1_scaffold_157_13
unknown

Not on your lists

comp(12649..12804)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_133_061G1_scaffold_157_14
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12942..13355)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23730.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
rrf2 family protein (putative transcriptional regulator)
L3_133_061G1_scaffold_157_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13526..16639)
DNA (3114bp) protein (1038aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81851.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_133_061G1_scaffold_157_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16815..17282)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81853.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_133_061G1_scaffold_157_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17299..17847)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81854.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_133_061G1_scaffold_157_18
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17850..18611)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81855.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_133_061G1_scaffold_157_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18613..19386)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81856.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_133_061G1_scaffold_157_20
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19504..20088)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GAE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23733.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_133_061G1_scaffold_157_21
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20218..20505)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81858.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_133_061G1_scaffold_157_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20516..23842)
DNA (3327bp) protein (1109aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81859.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_133_061G1_scaffold_157_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24378..24737)
DNA (360bp) protein (120aa)
Rrf2 family protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC92_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EGG81860.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Predicted transcriptional regulator
L3_133_061G1_scaffold_157_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24891..26057)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81724.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
YibE/F-like protein
L3_133_061G1_scaffold_157_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26080..31848)
DNA (5769bp) protein (1923aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22323.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell wall binding domain-containing protein
L3_133_061G1_scaffold_157_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31946..34045)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PN95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22324.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
5'-nucleotidase domain-containing protein
L3_133_061G1_scaffold_157_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34076..34897)
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Purine nucleoside phosphorylase n=2 Tax=Clostridium RepID=B6FQI1_9CLOT
purine nucleoside phosphorylase
L3_133_061G1_scaffold_157_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34917..35645)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22326.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cyclic nucleotide-binding domain-containing protein
L3_133_061G1_scaffold_157_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35667..36302)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22327.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_133_061G1_scaffold_157_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36316..37506)
DNA (1191bp) protein (397aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=2 Tax=Clostridium RepID=B6FQH8_9CLOT
Displaying items 1-30 of 84 in total

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