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L3_133_091G1_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_091G1_scaffold_119_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65..808)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22671.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_133_091G1_scaffold_119_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(821..2071)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82516.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_133_091G1_scaffold_119_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2093..3382)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22670.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_133_091G1_scaffold_119_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3404..4669)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82516.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_133_091G1_scaffold_119_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4729..5574)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZXH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20586.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_133_091G1_scaffold_119_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5718..7055)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A3E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20585.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_133_091G1_scaffold_119_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7060..7899)
DNA (840bp) protein (280aa)
ABC transporter, permease protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKP4_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EET58781.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_133_091G1_scaffold_119_8
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7896..8738)
DNA (843bp) protein (281aa)
ABC-type sugar transport system permease component n=2 Tax=Blautia RepID=R5C7V4_9FIRM
ABC-type sugar transport system permease component {ECO:0000313|EMBL:CCX59696.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_133_091G1_scaffold_119_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8742..10085)
DNA (1344bp) protein (448aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=B6FN73_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEA82520.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type sugar transport system, periplasmic component
L3_133_091G1_scaffold_119_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10088..10792)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42264.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_133_091G1_scaffold_119_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10806..11648)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NBL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80503.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_133_091G1_scaffold_119_12
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11645..12433)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80504.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_133_091G1_scaffold_119_13
unknown

Not on your lists

comp(12430..13320)
DNA (891bp) protein (297aa)

This feature has no annotations

L3_133_091G1_scaffold_119_14
unknown

Not on your lists

comp(13376..13750)
DNA (375bp) protein (125aa)

This feature has no annotations

L3_133_091G1_scaffold_119_15
unknown

Not on your lists

comp(13958..14155)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_133_091G1_scaffold_119_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14127..14651)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FN67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82514.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L3_133_091G1_scaffold_119_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14782..16080)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QL25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22667.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_133_091G1_scaffold_119_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16083..16802)
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN65_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEA82512.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulator of the LytR/AlgR family
L3_133_091G1_scaffold_119_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16817..17293)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82511.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function (DUF1653).
L3_133_091G1_scaffold_119_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17318..18532)
DNA (1215bp) protein (405aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22663.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_133_091G1_scaffold_119_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18559..19491)
DNA (933bp) protein (311aa)
Signal recognition particle receptor FtsY n=2 Tax=Clostridium RepID=B6FN62_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
signal recognition particle-docking protein FtsY
L3_133_091G1_scaffold_119_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19500..23060)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN61_9CLOT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
condensin subunit Smc
L3_133_091G1_scaffold_119_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23068..23763)
DNA (696bp) protein (232aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGF1_9CLOT
L3_133_091G1_scaffold_119_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23820..24050)
DNA (231bp) protein (77aa)
Acyl carrier protein n=2 Tax=Clostridium RepID=B6FN59_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acyl carrier protein
L3_133_091G1_scaffold_119_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24080..25105)
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphate acyltransferase n=2 Tax=Clostridium RepID=B6FN58_9CLOT
phosphate:acyl-[acyl carrier protein] acyltransferase
L3_133_091G1_scaffold_119_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25295..25474)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=2 Tax=Clostridium RepID=B6FN57_9CLOT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ribosomal protein L32
L3_133_091G1_scaffold_119_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25478..26005)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PW11_9CLOT
Putative ACR, COG1399 {ECO:0000313|EMBL:EEA82503.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L3_133_091G1_scaffold_119_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26083..27273)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Clostridium RepID=B6FN55_9CLOT
L3_133_091G1_scaffold_119_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27298..28293)
DNA (996bp) protein (332aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=2 Tax=Clostridium RepID=B6FN54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22654.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_133_091G1_scaffold_119_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28442..29773)
DNA (1332bp) protein (444aa)
Magnesium transporter n=2 Tax=Clostridium RepID=B6FN53_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
magnesium transporter
Displaying items 1-30 of 110 in total

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