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L3_133_091G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_091G1_scaffold_220_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..811)
DNA (810bp) protein (270aa)
ATPase AAA n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B54C06
Uncharacterized protein {ECO:0000313|EMBL:CCZ54619.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ATPase AAA
L3_133_091G1_scaffold_220_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(979..1266)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET59146.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_133_091G1_scaffold_220_3
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1327..2013)
DNA (687bp) protein (229aa)
Predicted phosphoesterase or phosphohydrolase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9W8_RUMC1
Predicted phosphoesterase or phosphohydrolase
Predicted phosphoesterase or phosphohydrolase {ECO:0000313|EMBL:CBL16413.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_133_091G1_scaffold_220_4
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2523..2696)
DNA (174bp) protein (58aa)
DDE Tnp 1-associated (Fragment) n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R5L6_9FIRM
DDE Tnp 1-associated {ECO:0000313|EMBL:EIC94974.1}; Flags: Fragment;; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
L3_133_091G1_scaffold_220_5
unknown

Not on your lists

comp(3035..3163)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_133_091G1_scaffold_220_6
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3519..3695)
DNA (177bp) protein (59aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F038_CLOS4
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERJ00483.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L3_133_091G1_scaffold_220_7
unknown

Not on your lists

comp(3930..4106)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_133_091G1_scaffold_220_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4211..5404)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF87_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06765.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5377..5724)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF87_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06765.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5795..6958)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF86_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06764.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7004..7147)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF86_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06764.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7298..7549)
DNA (252bp) protein (84aa)
Uncharacterized conserved protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DFJ9_CLOSC
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK76473.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_133_091G1_scaffold_220_13
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7613..7978)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7B1S2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD57172.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L3_133_091G1_scaffold_220_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8007..9443)
DNA (1437bp) protein (479aa)
Ribonuclease HI n=1 Tax=Blautia sp. KLE 1732 RepID=U2EJE3_9FIRM
Ribonuclease HI {ECO:0000313|EMBL:ERI93001.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ribonuclease h
L3_133_091G1_scaffold_220_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10048..10284)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5II16_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHI58832.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_133_091G1_scaffold_220_16
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10541..11848)
DNA (1308bp) protein (436aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31213.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_133_091G1_scaffold_220_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11971..12180)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF83_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06761.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12206..13099)
DNA (894bp) protein (298aa)
DNA binding domain, excisionase family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHV2_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EET59842.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
MCYN0646; Fic family protein
L3_133_091G1_scaffold_220_19
unknown

Not on your lists

comp(13235..13453)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_133_091G1_scaffold_220_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13570..13824)
DNA (255bp) protein (85aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF78_CLOSV
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS06756.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_133_091G1_scaffold_220_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14316..14684)
DNA (369bp) protein (123aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6I0_9CLOT
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EFE14168.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Mn-dependent transcriptional regulator
L3_133_091G1_scaffold_220_22
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14696..16432)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AJD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47822.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_133_091G1_scaffold_220_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16445..18190)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AJD4_9FIRM
ABC-type multidrug transport system, ATPase and permease components
Uncharacterized protein {ECO:0000313|EMBL:EHL75076.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_133_091G1_scaffold_220_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18187..19656)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38739.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_133_091G1_scaffold_220_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19673..20413)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38740.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_133_091G1_scaffold_220_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20413..20997)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38741.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
conserved hypothetical integral membrane protein TIGR02185
L3_133_091G1_scaffold_220_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21199..22224
DNA (1026bp) protein (342aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHL3_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDD77460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC-type DNA-binding domain-containing proteins
L3_133_091G1_scaffold_220_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22296..23723)
DNA (1428bp) protein (476aa)
lgrD: linear gramicidin synthase subunit D (EC:5.1.1.- 1.-.-.-)
LgrD: linear gramicidin synthase subunit D {ECO:0000313|EMBL:AGX42691.1}; EC=1.-.-.- {ECO:0000313|EMBL:AGX42691.1};; EC=5.1.1.- {ECO:0000313|EMBL:AGX42691.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
LgrD: linear gramicidin synthase subunit D n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSQ1_CLOSA
L3_133_091G1_scaffold_220_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23773..24849)
DNA (1077bp) protein (359aa)
Thiazolinyl imide reductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ23_CLOSA
thiazolinyl imide reductase
Thiazolinyl imide reductase {ECO:0000313|EMBL:AGX42690.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_133_091G1_scaffold_220_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24925..30336)
DNA (5412bp) protein (1804aa)
High-molecular-weight protein 2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 PF3_CLOSA">RepID=U5MPF3_CLOSA
irp2; high-molecular-weight protein 2
High-molecular-weight protein 2 {ECO:0000313|EMBL:AGX42689.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying items 1-30 of 69 in total

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