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L3_133_091G1_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_091G1_scaffold_286_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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196..915
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42566.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
VTC domain protein
L3_133_091G1_scaffold_286_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

908..1603
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22790.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_133_091G1_scaffold_286_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1615..3519
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82927.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_133_091G1_scaffold_286_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3550..4599
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22788.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glycosyltransferase Family 2 protein
L3_133_091G1_scaffold_286_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4601..5503
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83221.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
exopolysaccharide biosynthesis protein
L3_133_091G1_scaffold_286_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5478..5864
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22786.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
membrane protein
L3_133_091G1_scaffold_286_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5905..6486
DNA (582bp) protein (194aa)
RelA/SpoT domain protein n=2 Tax=Clostridium RepID=B6FL35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22785.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_133_091G1_scaffold_286_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6775..9105
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22784.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ferrous iron transporter FeoB
L3_133_091G1_scaffold_286_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9180..10541
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHY7_CLOSV
MATE efflux family protein {ECO:0000313|EMBL:EDS05735.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative efflux protein, MATE family
L3_133_091G1_scaffold_286_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10626..12170
DNA (1545bp) protein (515aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Clostridium RepID=B6FL37_9CLOT
L3_133_091G1_scaffold_286_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..13222
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LTV1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24209.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_133_091G1_scaffold_286_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13252..14124
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z4U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51999.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_133_091G1_scaffold_286_13

Not on your lists

14202..15182
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1T7Y2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC65708.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_091G1_scaffold_286_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15196..15420
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4V1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM52001.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_133_091G1_scaffold_286_15

Not on your lists

15453..15734
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z4V2_9FIRM
Transcriptional regulator-like protein {ECO:0000313|EMBL:EKC44539.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_091G1_scaffold_286_16

Not on your lists

15738..16508
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1TPZ5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC68360.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_091G1_scaffold_286_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16540..17442
DNA (903bp) protein (301aa)
Uncharacterized protein n=3 Tax=root RepID=A5Z4V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52003.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_133_091G1_scaffold_286_18
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17473..19497
DNA (2025bp) protein (675aa)
Conserved domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4V4_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDM52004.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_133_091G1_scaffold_286_19

Not on your lists

19516..20346
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RRT1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46254.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L3_133_091G1_scaffold_286_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20343..20759
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52007.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_133_091G1_scaffold_286_21

Not on your lists

20777..21592
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SFR2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46256.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_091G1_scaffold_286_22

Not on your lists

21644..22114
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TVP3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC73918.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_091G1_scaffold_286_23

Not on your lists

22111..22617
DNA (507bp) protein (169aa)
Type IV secretory pathway, VirD4 component (Fragment) n=1 Tax=human gut metagenome RepID=K1TLC4_9ZZZZ
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EKC73917.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Type IV secretory pathway, VirD4 components
L3_133_091G1_scaffold_286_24
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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23177..24994
DNA (1818bp) protein (606aa)
HNH endonuclease domain protein {ECO:0000313|EMBL:AGS74645.1}; EC=3.1.25.- {ECO:0000313|EMBL:AGS74645.1};; TaxID=1305849 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Aus0085.;"
HNH endonuclease domain protein (EC:3.1.25.-)
Reverse transcriptase (RNA-dependent DNA polymerase) n=8 Tax=Firmicutes RepID=E9SR44_CLOSY
L3_133_091G1_scaffold_286_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25169..26458
DNA (1290bp) protein (430aa)
Type IV secretory pathway, VirD4 components n=2 Tax=root RepID=D4LTU3_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL24201.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_133_091G1_scaffold_286_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26703..26918
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z4W3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24200.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_133_091G1_scaffold_286_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26929..27792
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=root RepID=A5Z4W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52014.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_133_091G1_scaffold_286_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27909..29180)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=4 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77536.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
transposase IS111A/IS1328/IS1533
L3_133_091G1_scaffold_286_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29479..29931
DNA (453bp) protein (151aa)
SpoVG n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4W5_9FIRM
SpoVG {ECO:0000313|EMBL:EDM52015.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Uncharacterized protein, involved in the regulation of septum location
L3_133_091G1_scaffold_286_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29931..30488
DNA (558bp) protein (186aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Transcriptional activator, adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CBL24197.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBL24197.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Transcriptional activator, adenine-specific DNA methyltransferase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LTT9_9FIRM
Displaying items 1-30 of 61 in total

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