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L3_133_091G1_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_091G1_scaffold_320_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(627..2021)
DNA (1395bp) protein (465aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDN79049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDN79049.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridiales RepID=A7AZ44_RUMGN
L3_133_091G1_scaffold_320_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2021..2911)
DNA (891bp) protein (297aa)
Ferredoxin--NADP+ reductase, subunit alpha {ECO:0000313|EMBL:EDN79050.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EDN79050.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Ferredoxin--NADP+ reductase, subunit alpha n=4 Tax=Clostridiales RepID=A7AZ45_RUMGN
L3_133_091G1_scaffold_320_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3076..4257)
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase n=4 Tax=Clostridiales RepID=A7AZ47_RUMGN
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EGN49760.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Alcohol dehydrogenase, class IV
L3_133_091G1_scaffold_320_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4444..5685)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TSF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66194.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Tetratricopeptide repeat.
L3_133_091G1_scaffold_320_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5697..6536)
DNA (840bp) protein (280aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=4 Tax=Clostridiales RepID=A7AZ49_RUMGN
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_133_091G1_scaffold_320_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6548..8221)
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Clostridiales RepID=A7AZ50_RUMGN
L3_133_091G1_scaffold_320_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8238..10802)
DNA (2565bp) protein (855aa)
FtsK/SpoIIIE family protein n=3 Tax=Lachnospiraceae RepID=A7AZ51_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20498.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA translocase FtsK
L3_133_091G1_scaffold_320_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10867..11556)
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BZG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20499.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Protease subunit of ATP-dependent Clp proteases
L3_133_091G1_scaffold_320_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11710..12984)
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Clostridiales RepID=A7AZ54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20500.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_133_091G1_scaffold_320_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12977..13756)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TKH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49767.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_133_091G1_scaffold_320_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13892..14023)
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZ58_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49769.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_133_091G1_scaffold_320_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14124..14855)
DNA (732bp) protein (244aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BZG7_RUMGN
Probable transcriptional regulatory protein RUMGNA_00575 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein TIGR01033
L3_133_091G1_scaffold_320_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14955..15302)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
mRNA interferase n=4 Tax=Clostridiales RepID=A7AZ60_RUMGN
Growth inhibitor
L3_133_091G1_scaffold_320_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15400..16548)
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Ruminococcus gnavus RepID=A7AZ61_RUMGN
L3_133_091G1_scaffold_320_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16551..18023)
DNA (1473bp) protein (491aa)
YjeF domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ62_RUMGN
YjeF family domain-containing protein {ECO:0000313|EMBL:ETD20507.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L3_133_091G1_scaffold_320_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18139..18783)
DNA (645bp) protein (215aa)
Redox-sensing transcriptional repressor Rex n=4 Tax=Clostridiales RepID=F7JSX4_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CoA-binding protein
L3_133_091G1_scaffold_320_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18935..20860
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7AZ64_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN79069.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_133_091G1_scaffold_320_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20893..21543)
DNA (651bp) protein (217aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZ65_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20510.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_133_091G1_scaffold_320_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21536..22027)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor n=2 Tax=Lachnospiraceae RepID=F7JSX7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_133_091G1_scaffold_320_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22229..23425)
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=3 Tax=Clostridiales RepID=F7JSX8_9FIRM
L3_133_091G1_scaffold_320_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23439..24104)
DNA (666bp) protein (222aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridiales RepID=A7AZ68_RUMGN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDN79073.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, GntR family
L3_133_091G1_scaffold_320_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24127..25515)
DNA (1389bp) protein (463aa)
HMGL-like protein n=4 Tax=Clostridiales RepID=A7AZ69_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20514.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Isopropylmalate/homocitrate/citramalate synthases
L3_133_091G1_scaffold_320_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25673..26836)
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSH4_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCZ66214.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_133_091G1_scaffold_320_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26838..27920)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=3 Tax=Lachnospiraceae RepID=A7AZ71_RUMGN
L3_133_091G1_scaffold_320_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27967..29646)
DNA (1680bp) protein (560aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=4 Tax=Clostridiales RepID=A7AZ72_RUMGN
L3_133_091G1_scaffold_320_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29659..31332)
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Clostridiales RepID=A7AZ73_RUMGN
L3_133_091G1_scaffold_320_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31374..32459)
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Lachnospiraceae RepID=A7AZ74_RUMGN
L3_133_091G1_scaffold_320_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32640..32909)
DNA (270bp) protein (90aa)
Preprotein translocase, YajC subunit n=4 Tax=Clostridiales RepID=A7AZ75_RUMGN
Preprotein translocase subunit {ECO:0000313|EMBL:CCZ66219.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
preprotein translocase, YajC subunit
L3_133_091G1_scaffold_320_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33048..34226)
DNA (1179bp) protein (393aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=3 Tax=Clostridiales RepID=A7AZ77_RUMGN
L3_133_091G1_scaffold_320_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34264..35808)
DNA (1545bp) protein (515aa)
ErfK/YbiS/YcfS/YnhG n=3 Tax=Lachnospiraceae RepID=A7AZ78_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
Displaying items 1-30 of 95 in total

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