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L3_133_091G1_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_091G1_scaffold_398_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60..263)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYZ2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN42463.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_133_091G1_scaffold_398_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(332..1240)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYY8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78993.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
plasmid segregation actin-type ATPase ParM
L3_133_091G1_scaffold_398_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1352..1669)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C052_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN42461.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_133_091G1_scaffold_398_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1729..2130)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AYZ0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20401.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_133_091G1_scaffold_398_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2249..2485
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AYZ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20402.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Helix-turn-helix.
L3_133_091G1_scaffold_398_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2699..2956
DNA (258bp) protein (86aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=B6FUI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN42458.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Helix-turn-helix.
L3_133_091G1_scaffold_398_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3091..3405)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7AYZ3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20404.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_133_091G1_scaffold_398_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3669..4136)
DNA (468bp) protein (156aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7AYZ4_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78999.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_133_091G1_scaffold_398_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4150..5460)
DNA (1311bp) protein (437aa)
ABC superfamily ATP binding cassette transporter (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0Y8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49670.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_133_091G1_scaffold_398_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5473..6789)
DNA (1317bp) protein (439aa)
Efflux ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7AYZ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49671.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_133_091G1_scaffold_398_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6864..8237)
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sensor histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ04_RUMGN
L3_133_091G1_scaffold_398_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8221..8892)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49673.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_091G1_scaffold_398_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9022..9882)
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=3 Tax=Lachnospiraceae RepID=A7AZ00_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49674.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
EDD domain protein, DegV family
L3_133_091G1_scaffold_398_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..11263)
DNA (1365bp) protein (455aa)
UPF0210 protein RUMGNA_00516 n=3 Tax=Lachnospiraceae RepID=A7AZ01_RUMGN
UPF0210 protein HMPREF1201_00408 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_133_091G1_scaffold_398_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11291..11563)
DNA (273bp) protein (91aa)
UPF0237 protein RUMGNA_00517 n=3 Tax=Lachnospiraceae RepID=A7AZ02_RUMGN
UPF0237 protein HMPREF0991_00010 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ACT domain-containing protein
L3_133_091G1_scaffold_398_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11581..12378)
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ03_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49677.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_133_091G1_scaffold_398_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12375..12956)
DNA (582bp) protein (194aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAP7_9FIRM
L3_133_091G1_scaffold_398_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12959..15574)
DNA (2616bp) protein (872aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRB1_9FIRM
L3_133_091G1_scaffold_398_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15630..16073)
DNA (444bp) protein (148aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ06_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49680.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_133_091G1_scaffold_398_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16178..16918)
DNA (741bp) protein (247aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TR30_9FIRM
L3_133_091G1_scaffold_398_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17005..17631)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=V8BZ14_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49682.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted integral membrane protein
L3_133_091G1_scaffold_398_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17628..17900)
DNA (273bp) protein (91aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=A7AZ09_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20419.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, ArsR family
L3_133_091G1_scaffold_398_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18293..18838
DNA (546bp) protein (182aa)
Putative hydroxydechloroatrazine ethylaminohydrolase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ11_RUMGN
Putative hydroxydechloroatrazine ethylaminohydrolase {ECO:0000313|EMBL:EDN79015.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hydroxydechloroatrazine ethylaminohydrolase
L3_133_091G1_scaffold_398_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18933..19406
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ12_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79017.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hydroxydechloroatrazine ethylaminohydrolase
L3_133_091G1_scaffold_398_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19488..20867
DNA (1380bp) protein (460aa)
Putative permease n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ13_RUMGN
Putative permease {ECO:0000313|EMBL:EDN79018.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
uracil-xanthine permease
L3_133_091G1_scaffold_398_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20997..22916)
DNA (1920bp) protein (640aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ14_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN79019.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
NADH:flavin oxidoreductase
L3_133_091G1_scaffold_398_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23002..23985)
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7AZ15_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49689.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
bacterial regulatory helix-turn-helix s, AraC family protein
L3_133_091G1_scaffold_398_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24037..24195)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C174_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49732.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_133_091G1_scaffold_398_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24197..24703)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C088_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49733.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acetyltransferase
L3_133_091G1_scaffold_398_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24700..26001)
DNA (1302bp) protein (434aa)
Multidrug efflux protein n=3 Tax=Lachnospiraceae RepID=A7AZ17_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49734.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative efflux protein, MATE family
Displaying items 1-30 of 52 in total

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