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L3_133_123G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_35_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(170..646)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=A7LXH5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68778.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_133_123G1_scaffold_35_2
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1048..2586
DNA (1539bp) protein (513aa)
Hydrolase, carbon-nitrogen family n=8 Tax=Bacteroides RepID=C3QKK8_9BACE
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EEO52531.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
carbon-nitrogen hydrolase
L3_133_123G1_scaffold_35_3
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2685..3734)
DNA (1050bp) protein (350aa)
Inner membrane protein YhiM n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0K7_9BACE
Inner membrane protein YhiM {ECO:0000313|EMBL:EFI40256.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Protein of unknown function (DUF2776).
L3_133_123G1_scaffold_35_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3945..7433
DNA (3489bp) protein (1163aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=4 Tax=Bacteroides RepID=D4WM45_BACOV
L3_133_123G1_scaffold_35_5
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7469..7849
DNA (381bp) protein (127aa)
DnaK suppressor protein n=23 Tax=Bacteroides RepID=D6D706_9BACE
DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ92322.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L3_133_123G1_scaffold_35_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7947..8603
DNA (657bp) protein (219aa)
signal peptidase II . Aspartic peptidase. MEROPS family A08 (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Lipoprotein signal peptidase n=15 Tax=Bacteroides RepID=D6D705_9BACE
L3_133_123G1_scaffold_35_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8593..9669
DNA (1077bp) protein (359aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QKK3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN06284.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_133_123G1_scaffold_35_8
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9675..10061
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QKK2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ04386.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_133_123G1_scaffold_35_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10012..10776)
DNA (765bp) protein (255aa)
RNA methyltransferase, TrmH family n=2 Tax=Bacteroides RepID=D7JBL1_9BACE
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:KDS19129.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
rRNA methylases
L3_133_123G1_scaffold_35_10
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10919..13228
DNA (2310bp) protein (770aa)
Outer membrane protein, OMP85 family n=5 Tax=Bacteroides RepID=C3QKK0_9BACE
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:EEZ04388.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Outer membrane protein/protective antigen OMA87
L3_133_123G1_scaffold_35_11
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13182..13634)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JJ44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86824.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_133_123G1_scaffold_35_12
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13726..14277)
DNA (552bp) protein (184aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QKJ8_9BACE
Membrane protein {ECO:0000313|EMBL:EFI11040.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Domain of unknown function (DUF3332).
L3_133_123G1_scaffold_35_13
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14371..14820)
DNA (450bp) protein (150aa)
Predicted membrane protein n=8 Tax=Bacteroides RepID=D6D6Z9_9BACE
Predicted membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EGN06290.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_133_123G1_scaffold_35_14
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14964..15230
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UVM6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI11042.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_133_123G1_scaffold_35_15
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15355..15777)
DNA (423bp) protein (141aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QKJ5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65792.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_133_123G1_scaffold_35_16
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15874..17262
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JJ40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86819.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
permease
L3_133_123G1_scaffold_35_17
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17345..18148
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=6 Tax=Bacteroides RepID=C3QKJ3_9BACE
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEZ04395.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_133_123G1_scaffold_35_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18590..19996)
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=2 Tax=Bacteroides RepID=F7LYB2_9BACE
L3_133_123G1_scaffold_35_19
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20195..21262
DNA (1068bp) protein (356aa)
Transcriptional regulators n=8 Tax=Bacteroides RepID=D6D6Z3_9BACE
Transcriptional regulators
Transcriptional regulator (LacI family) {ECO:0000313|EMBL:EFI11428.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_35_20
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21289..22728
DNA (1440bp) protein (480aa)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
tagaturonate reductase (EC:1.1.1.58)
Altronate oxidoreductase n=5 Tax=Bacteroides RepID=C3QKJ0_9BACE
L3_133_123G1_scaffold_35_21
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22798..23331)
DNA (534bp) protein (178aa)
FHA domain protein n=2 Tax=Bacteroides RepID=D7JAL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN06299.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_133_123G1_scaffold_35_22
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23350..24438)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LYB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN06300.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Sporulation related domain.
L3_133_123G1_scaffold_35_23
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24529..25077
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Bacteroides RepID=D6D6Y9_9BACE
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFI11424.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_35_24
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25104..26417
DNA (1314bp) protein (438aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=8 Tax=Bacteroides RepID=D6D6Y8_9BACE
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EFI11423.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_35_25
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26456..27250
DNA (795bp) protein (265aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=D0TPS8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY86810.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_133_123G1_scaffold_35_26
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27333..28595)
DNA (1263bp) protein (421aa)
ATP-dependent RNA helicase RhlE n=3 Tax=Bacteroides RepID=D7JAL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86809.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
ATP-dependent RNA helicase
L3_133_123G1_scaffold_35_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28642..29871)
DNA (1230bp) protein (410aa)
phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UVW8_9BACE
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EIY86808.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_133_123G1_scaffold_35_28
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30138..30641
DNA (504bp) protein (168aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QKH7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86807.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_133_123G1_scaffold_35_29
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30892..31989)
DNA (1098bp) protein (366aa)
Predicted permeases n=6 Tax=Bacteroides RepID=D6D6Y5_9BACE
Predicted permeases
Membrane protein {ECO:0000313|EMBL:EFI11418.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_35_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31993..33123)
DNA (1131bp) protein (377aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Queuine tRNA-ribosyltransferase n=8 Tax=Bacteroides RepID=D6D6Y4_9BACE
Displaying items 1-30 of 161 in total

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