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L3_133_123G1_scaffold_40

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Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_40_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

178..4719
DNA (4542bp) protein (1514aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) n=6 Tax=Clostridium clostridioforme RepID=N9VKQ3_9CLOT
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ENZ60932.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_133_123G1_scaffold_40_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4735..6222
DNA (1488bp) protein (496aa)
Glutamate synthase, NADH/NADPH, small subunit n=8 Tax=Clostridium clostridioforme RepID=N9VK36_9CLOT
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:ENZ08917.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glutamate synthase, small subunit
L3_133_123G1_scaffold_40_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6989..7480
DNA (492bp) protein (164aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X5R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60934.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_133_123G1_scaffold_40_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7597..8820
DNA (1224bp) protein (408aa)
RNA polymerase sigma factor n=8 Tax=Clostridium clostridioforme RepID=G5I3J7_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_133_123G1_scaffold_40_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9165..10574)
DNA (1410bp) protein (470aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=8 Tax=Clostridium clostridioforme RepID=N9YKW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60936.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted Na+/dicarboxylate symporter
L3_133_123G1_scaffold_40_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10666..12204)
DNA (1539bp) protein (513aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=7 Tax=Clostridium clostridioforme RepID=N9VKQ8_9CLOT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ENZ60937.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_133_123G1_scaffold_40_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12260..13444)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9VK41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60938.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
class I and II aminotransferase
L3_133_123G1_scaffold_40_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14063..14539
DNA (477bp) protein (159aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9X5S1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60939.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
MarR family transcriptional regulator
L3_133_123G1_scaffold_40_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14700..16724
DNA (2025bp) protein (675aa)
Molecular chaperone HtpG n=8 Tax=Clostridium clostridioforme RepID=N9WU38_9CLOT
Molecular chaperone HtpG {ECO:0000313|EMBL:ENZ60940.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Molecular chaperone, HSP90 family
L3_133_123G1_scaffold_40_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16886..18298
DNA (1413bp) protein (471aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WNH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13215.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_133_123G1_scaffold_40_11
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18636..19496
DNA (861bp) protein (287aa)
DegV family EDD domain-containing protein n=9 Tax=Clostridium RepID=N9VKR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24996.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
degV family protein
L3_133_123G1_scaffold_40_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19517..20800
DNA (1284bp) protein (428aa)
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) n=9 Tax=Clostridium RepID=N9VK47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24995.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
capsule synthesis protein CapA
L3_133_123G1_scaffold_40_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20719..21720)
DNA (1002bp) protein (334aa)
TIGR01212 family radical SAM protein n=9 Tax=Clostridium RepID=G5I3I8_9CLOT
Radical SAM protein {ECO:0000313|EMBL:ENZ60944.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_133_123G1_scaffold_40_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21896..23188
DNA (1293bp) protein (431aa)
galactokinase (EC:2.7.1.6)
Galactokinase n=7 Tax=Clostridium clostridioforme RepID=N9WU44_9CLOT
Galactokinase {ECO:0000313|EMBL:ENZ60945.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_133_123G1_scaffold_40_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23357..24103
DNA (747bp) protein (249aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13210.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_133_123G1_scaffold_40_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24170..25627)
DNA (1458bp) protein (486aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=7 Tax=Clostridium clostridioforme RepID=G5I3I5_9CLOT
L3_133_123G1_scaffold_40_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25848..26141
DNA (294bp) protein (98aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VK53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60948.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_133_123G1_scaffold_40_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26162..29296
DNA (3135bp) protein (1045aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=8 Tax=Clostridium RepID=G5I3I3_9CLOT
L3_133_123G1_scaffold_40_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29412..31865
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Phosphorylase n=5 Tax=Clostridium clostridioforme RepID=G5I3I2_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L3_133_123G1_scaffold_40_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31910..32800
DNA (891bp) protein (297aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=9 Tax=Clostridium RepID=G5I3I1_9CLOT
L3_133_123G1_scaffold_40_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32843..33493
DNA (651bp) protein (217aa)
Vitamin B12 dependent methionine synthase activation subunit n=9 Tax=Clostridium RepID=N9VKS3_9CLOT
Vitamin B12 dependent methionine synthase activation subunit {ECO:0000313|EMBL:ENZ60953.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Vitamin B12 dependent methionine synthase activation subunit
L3_133_123G1_scaffold_40_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33552..34586
DNA (1035bp) protein (345aa)
Threonine aldolase n=9 Tax=Clostridium RepID=N9VK58_9CLOT
Threonine aldolase {ECO:0000313|EMBL:ENZ60954.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
low specificity L-threonine aldolase
L3_133_123G1_scaffold_40_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34608..37061
DNA (2454bp) protein (818aa)
Methionine synthase n=9 Tax=Clostridium RepID=N9YZN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24984.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
homocysteine S-methyltransferase
L3_133_123G1_scaffold_40_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37373..37588
DNA (216bp) protein (72aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WNG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13201.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_133_123G1_scaffold_40_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37821..38639
DNA (819bp) protein (273aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WP10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24982.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_133_123G1_scaffold_40_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38675..39565)
DNA (891bp) protein (297aa)
DegV family EDD domain-containing protein n=9 Tax=Clostridium RepID=N9VKS8_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ13199.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_133_123G1_scaffold_40_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39734..40411
DNA (678bp) protein (226aa)
HAD hydrolase, family IA n=9 Tax=Clostridium RepID=N9VK63_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:ENZ60959.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
HAD-superfamily hydrolase
L3_133_123G1_scaffold_40_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40416..41474
DNA (1059bp) protein (353aa)
Zinc ABC transporter substrate-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9YA33_9CLOT
Zinc ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ60960.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_133_123G1_scaffold_40_29
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41511..42287
DNA (777bp) protein (259aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
Zinc ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9WNF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24978.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_133_123G1_scaffold_40_30
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42284..43105
DNA (822bp) protein (274aa)
Zinc ABC transporter permease n=10 Tax=Clostridium RepID=N9WP04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63246.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
Displaying items 1-30 of 134 in total

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