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L3_133_123G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_65_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS17411.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS17411.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6H3_9FIRM
L3_133_123G1_scaffold_65_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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766..1185
DNA (420bp) protein (140aa)
DNA-binding helix-turn-helix protein n=5 Tax=Erysipelotrichaceae RepID=B0N6H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33149.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_123G1_scaffold_65_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1216..2526)
DNA (1311bp) protein (437aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6H1_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHM89321.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
signaling protein
L3_133_123G1_scaffold_65_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2569..3447)
DNA (879bp) protein (293aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Ribokinase n=4 Tax=Erysipelotrichaceae RepID=C3RMU7_9FIRM
Ribokinase {ECO:0000313|EMBL:EHM89322.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_133_123G1_scaffold_65_5
unknown

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comp(3612..3779)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_133_123G1_scaffold_65_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4102..4347
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17407.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_133_123G1_scaffold_65_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4411..5733
DNA (1323bp) protein (441aa)
NOL1/NOP2/sun family protein n=3 Tax=Erysipelotrichaceae RepID=B0N6G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89324.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
RNA methylase
L3_133_123G1_scaffold_65_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5730..6185
DNA (456bp) protein (152aa)
HD domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89325.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
putative HD superfamily hydrolase
L3_133_123G1_scaffold_65_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6622..7302)
DNA (681bp) protein (227aa)
FCD domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89326.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
bacterial regulatory s, gntR family protein
L3_133_123G1_scaffold_65_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7435..9153
DNA (1719bp) protein (573aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=5 Tax=Erysipelotrichaceae RepID=C3RMU2_9FIRM
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:CCZ33169.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_123G1_scaffold_65_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9158..10105
DNA (948bp) protein (316aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Erysipelotrichaceae RepID=B0N6G4_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EHQ44951.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_133_123G1_scaffold_65_12
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10107..11075
DNA (969bp) protein (323aa)
2-keto-3-deoxygluconate kinase (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AR35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44950.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_133_123G1_scaffold_65_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11571..12230)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89255.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_133_123G1_scaffold_65_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12227..12484)
DNA (258bp) protein (86aa)
TfoX C-terminal domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N6G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33200.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
TfoX domain-containing protein
L3_133_123G1_scaffold_65_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12593..13216)
DNA (624bp) protein (208aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17398.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_133_123G1_scaffold_65_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13206..13487)
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6F9_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDS17397.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ArsR family transcriptional regulator
L3_133_123G1_scaffold_65_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13547..14263)
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
1-acylglycerol-3-phosphate O-acyltransferase n=4 Tax=Coprobacillus RepID=C3RMT5_9FIRM
phospholipid/glycerol acyltransferase
L3_133_123G1_scaffold_65_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14268..14738)
DNA (471bp) protein (157aa)
Dihydrofolate reductase n=5 Tax=Erysipelotrichaceae RepID=B0N6F7_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:CCZ33208.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative dihydrofolate reductase
L3_133_123G1_scaffold_65_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14738..15616)
DNA (879bp) protein (293aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6F6_9FIRM
L3_133_123G1_scaffold_65_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15699..16376)
DNA (678bp) protein (226aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44942.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
L3_133_123G1_scaffold_65_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16439..17323)
DNA (885bp) protein (295aa)
ROK family protein n=3 Tax=Erysipelotrichaceae RepID=B0N6F4_9FIRM
ROK family protein {ECO:0000313|EMBL:EDS17392.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator
L3_133_123G1_scaffold_65_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17487..19220)
DNA (1734bp) protein (578aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Threonine--tRNA ligase n=5 Tax=Erysipelotrichaceae RepID=B0N6F3_9FIRM
thrS; threonyl-tRNA synthetase
L3_133_123G1_scaffold_65_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19504..19746)
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N6F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33218.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_123G1_scaffold_65_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19812..20537)
DNA (726bp) protein (242aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Pseudouridine synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6F1_9FIRM
pseudouridine synthase
L3_133_123G1_scaffold_65_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20697..22220
DNA (1524bp) protein (508aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N6F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44937.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_133_123G1_scaffold_65_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23377..24456
DNA (1080bp) protein (360aa)
dacB; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N6E8_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS17386.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_133_123G1_scaffold_65_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24449..25021
DNA (573bp) protein (191aa)
Transporter gate domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N6E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33226.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
nucleoside recognition domain-containing protein
L3_133_123G1_scaffold_65_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25014..25523
DNA (510bp) protein (170aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6E6_9FIRM
Spore maturation protein B {ECO:0000313|EMBL:CCZ33227.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
spmB; spore maturation protein B
L3_133_123G1_scaffold_65_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25602..26975)
DNA (1374bp) protein (458aa)
Transporter n=4 Tax=Erysipelotrichaceae RepID=B0N6E5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SNF family Na+-dependent transporter
L3_133_123G1_scaffold_65_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27089..27253)
DNA (165bp) protein (55aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33677.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying items 1-30 of 137 in total

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