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L3_133_123G1_scaffold_80

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Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_80_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(438..2060)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Escherichia coli 541-15 RepID=I4SH33_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EIL49774.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
hypothetical protein
L3_133_123G1_scaffold_80_2
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2053..3555)
DNA (1503bp) protein (501aa)
Transposon Tn7 transposition protein TnsD n=3 Tax=Gammaproteobacteria RepID=I4SH32_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ37900.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;"
L3_133_123G1_scaffold_80_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3557..5167)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=D7XXQ8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFJ99811.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
transporter, AcrB/AcrD/AcrF family protein
L3_133_123G1_scaffold_80_4
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5160..7247)
DNA (2088bp) protein (696aa)
Integrase catalytic subunit n=5 Tax=Enterobacteriaceae RepID=V1MEL7_SALSE
Integrase catalytic subunit {ECO:0000313|EMBL:ESF51443.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
integrase core domain-containing protein
L3_133_123G1_scaffold_80_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7234..8061)
DNA (828bp) protein (276aa)
TnsA endonuclease domain protein n=8 Tax=Gammaproteobacteria RepID=D7XXR0_ECOLX
Transposon Tn7 transposition protein tnsA
Transposon Tn7 transposition protein TnsA {ECO:0000313|EMBL:ESF51444.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_133_123G1_scaffold_80_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8193..9488
DNA (1296bp) protein (432aa)
Putative cyclic-di-GMP phosphodiesterase AdrB n=1 Tax=Escherichia coli 2756500 RepID=M9CBT6_ECOLX
yoaD; putative phosphodiesterase
YoaD protein {ECO:0000313|EMBL:EFE62445.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_133_123G1_scaffold_80_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9492..11048)
DNA (1557bp) protein (519aa)
UPF0053 inner membrane protein YoaE n=1151 Tax=Enterobacteriaceae RepID=YOAE_ECO57
hypothetical protein
Integral membrane protein TerC {ECO:0000313|EMBL:EOV78602.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_133_123G1_scaffold_80_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11036..11245)
DNA (210bp) protein (70aa)
Uncharacterized protein n=165 Tax=Escherichia coli RepID=B7USJ2_ECO27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI27470.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_133_123G1_scaffold_80_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..12482
DNA (972bp) protein (324aa)
PTS system mannose-specific EIIAB component n=1036 Tax=Enterobacteriaceae RepID=PTNAB_ECO57
manX; putative PTS system, mannose-specific component
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:ESA66463.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_133_123G1_scaffold_80_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12545..13345
DNA (801bp) protein (267aa)
Mannose permease IIC component n=1377 Tax=Enterobacteriaceae RepID=PTNC_ECO57
PTS system mannose/fructose/sorbose family transporter subunit IIC
Mannose permease IIC component {ECO:0000313|EMBL:EOV76374.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_133_123G1_scaffold_80_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13358..14209
DNA (852bp) protein (284aa)
Mannose permease IID component n=1286 Tax=Enterobacteriaceae RepID=PTND_ECO57
PTS system mannose/fructose/sorbose family transporter subunit IID
Mannose permease IID component {ECO:0000313|EMBL:EFK19716.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_133_123G1_scaffold_80_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14264..14722
DNA (459bp) protein (153aa)
Uncharacterized protein (Fragment) n=2 Tax=Escherichia coli RepID=D8AAU3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK73590.1}; Flags: Fragment;; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_133_123G1_scaffold_80_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15151..15717
DNA (567bp) protein (189aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=U9XWJ1_ECOLX
hypothetical protein
Probable manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_133_123G1_scaffold_80_14
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15714..16523)
DNA (810bp) protein (270aa)
rrmA; 23S rRNA methyltransferase (EC:2.1.1.51)
23S rRNA (guanine(745)-N(1))-methyltransferase n=193 Tax=Enterobacteriaceae RepID=RLMA_ECOLI
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:ACD06929.1}; TaxID=344609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii serotype 18 (strain CDC 3083-94 / BS512).;"
L3_133_123G1_scaffold_80_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16689..16898)
DNA (210bp) protein (70aa)
Cold shock-like protein CspC n=2241 Tax=Bacteria RepID=CSPC_ECO57
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK12929.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L3_133_123G1_scaffold_80_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17723..18010)
DNA (288bp) protein (96aa)
Uncharacterized protein YebO n=976 Tax=Enterobacteriaceae RepID=YEBO_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX27316.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_133_123G1_scaffold_80_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18387..18626
DNA (240bp) protein (80aa)
Uncharacterized protein YobH n=1056 Tax=Enterobacteriaceae RepID=YOBH_ECOL5
hypothetical protein
YobH-like family protein {ECO:0000313|EMBL:KEO33808.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L3_133_123G1_scaffold_80_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18769..19560)
DNA (792bp) protein (264aa)
Transcriptional regulator KdgR n=522 Tax=Enterobacteriaceae RepID=A8A125_ECOHS
kdgR; IclR-family transcriptional regulator
Transcriptional regulator KdgR {ECO:0000313|EMBL:ESD21135.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_133_123G1_scaffold_80_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19737..21110
DNA (1374bp) protein (458aa)
Uncharacterized transporter YebQ n=373 Tax=Enterobacteriaceae RepID=YEBQ_ECOLI
yebQ; putative transport protein
Putative transport protein {ECO:0000313|EMBL:EID65002.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_133_123G1_scaffold_80_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21156..22037)
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Protease HtpX n=1252 Tax=Enterobacteriaceae RepID=HTPX_ECO24
heat shock protein HtpX
L3_133_123G1_scaffold_80_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22229..24277)
DNA (2049bp) protein (683aa)
prc; tail-specific protease (EC:3.4.21.102)
Carboxy-terminal protease for penicillin-binding protein 3 n=267 Tax=Enterobacteriaceae RepID=J7QS24_ECOLX
C-processing peptidase {ECO:0000313|EMBL:EGU99552.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_133_123G1_scaffold_80_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24297..24995)
DNA (699bp) protein (233aa)
ProP effector n=619 Tax=Enterobacteriaceae RepID=PROQ_ECO55
ProP expression regulator
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L3_133_123G1_scaffold_80_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25092..25643)
DNA (552bp) protein (184aa)
GAF domain protein n=39 Tax=Enterobacteriaceae RepID=B2U474_SHIB3
putative GAF sensor protein
Protein yebR {ECO:0000313|EMBL:EOV62216.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_133_123G1_scaffold_80_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25719..27002
DNA (1284bp) protein (428aa)
Integral membrane protein, PqiA family n=210 Tax=Enterobacteriaceae RepID=A7ZMV6_ECO24
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AFH11627.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_133_123G1_scaffold_80_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26971..29604
DNA (2634bp) protein (878aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2V243_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK05795.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
yebT; hypothetical protein
L3_133_123G1_scaffold_80_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29678..31123
DNA (1446bp) protein (482aa)
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}; rRNA (cytosine-C(5)-)-methyltransferase RsmF {ECO:0000256|HAMAP-Rule:MF_01579}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
Ribosomal RNA small subunit methyltransferase F n=6 Tax=Escherichia coli RepID=L3EY48_ECOLX
yebU; rRNA (cytosine-C(5)-)-methyltransferase RsmF
L3_133_123G1_scaffold_80_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31241..31477
DNA (237bp) protein (79aa)
Uncharacterized protein YebV n=1338 Tax=Bacteria RepID=YEBV_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66442.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_133_123G1_scaffold_80_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31498..31773
DNA (276bp) protein (92aa)
Uncharacterized protein n=841 Tax=Bacteria RepID=C3T632_ECOLX
yebW; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK73609.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_133_123G1_scaffold_80_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31774..32430)
DNA (657bp) protein (219aa)
pphA; serine/threonine protein phosphatase 1 (EC:3.1.3.16)
Serine/threonine-protein phosphatase 1 n=6 Tax=Escherichia coli RepID=L2V0S5_ECOLX
Serine/threonine-protein phosphatase 1 {ECO:0000313|EMBL:EQY60937.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
L3_133_123G1_scaffold_80_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32825..33166)
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=L2V247_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK05800.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Uncharacterized protein yebY
Displaying items 1-30 of 119 in total

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