ggKbase home page

L3_133_123G1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_143_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72..2168
DNA (2097bp) protein (699aa)
DNA mismatch repair protein MutL n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8E5_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
mutL; DNA mismatch repair protein MutL
L3_133_123G1_scaffold_143_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2440..2676
DNA (237bp) protein (79aa)
RNA-binding protein Hfq n=3 Tax=Clostridiales RepID=G9YVJ3_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hfq; Hfq protein
L3_133_123G1_scaffold_143_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2686..3978
DNA (1293bp) protein (431aa)
Putative membrane fusion protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57452.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3997..4704
DNA (708bp) protein (236aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Clostridiales RepID=G9YVJ1_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHO35192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4728..5228
DNA (501bp) protein (167aa)
Cell division protein SepF n=3 Tax=Clostridiales RepID=G9YVJ0_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
sepF; cell division protein SepF
L3_133_123G1_scaffold_143_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5416..6141
DNA (726bp) protein (242aa)
DivIVA domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57449.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative cell division protein
L3_133_123G1_scaffold_143_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6548..9343
DNA (2796bp) protein (932aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZT5_9CLOT
isoleucyl-tRNA synthetase
L3_133_123G1_scaffold_143_8
unknown

Not on your lists

9352..9906
DNA (555bp) protein (185aa)

This feature has no annotations

L3_133_123G1_scaffold_143_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9842..11626)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57447.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11774..12250
DNA (477bp) protein (159aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
lspA; putative signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL13_9CLOT
L3_133_123G1_scaffold_143_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12225..13139
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D6_9FIRM
L3_133_123G1_scaffold_143_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13352..13945
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57444.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative thiamine transporter
L3_133_123G1_scaffold_143_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13949..14767
DNA (819bp) protein (273aa)
HAD hydrolase, family IIB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI2_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EHM40356.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_133_123G1_scaffold_143_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15156..16409)
DNA (1254bp) protein (418aa)
Xaa-His dipeptidase (Fragment) n=2 Tax=Clostridiales RepID=G9YVI1_9FIRM
Xaa-His dipeptidase {ECO:0000313|EMBL:EHM40355.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
aminoacyl-histidine dipeptidase
L3_133_123G1_scaffold_143_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16803..17369)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35182.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17494..18078
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35181.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative HD superfamily hydrolase
L3_133_123G1_scaffold_143_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18082..19464
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57439.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative efflux protein, MATE family
L3_133_123G1_scaffold_143_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19506..19604)
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35179.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_143_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19896..21449
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35178.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21650..22696
DNA (1047bp) protein (349aa)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1C8C7_9FIRM
Chlorophyll synthesis pathway, bchC {ECO:0000313|EMBL:EHO35177.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
alcohol dehydrogenase GroES-like protein
L3_133_123G1_scaffold_143_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22710..23102
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase family protein n=3 Tax=Clostridiales RepID=G9YVG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35176.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_143_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23287..24033
DNA (747bp) protein (249aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=G9YVG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35175.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L3_133_123G1_scaffold_143_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24113..25069
DNA (957bp) protein (319aa)
Phosphotriesterase family protein n=2 Tax=Clostridiales RepID=G9YVG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57434.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25115..26056
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YVG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57433.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26078..27001
DNA (924bp) protein (308aa)
Putative glyoxylate reductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57432.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
L3_133_123G1_scaffold_143_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27017..28546
DNA (1530bp) protein (510aa)
Xylulokinase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C1_9FIRM
Xylulokinase {ECO:0000313|EMBL:EHO35232.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
xylulose kinase
L3_133_123G1_scaffold_143_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28560..29204
DNA (645bp) protein (215aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Clostridiales RepID=G9YVF9_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EHO35231.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_143_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29213..30097
DNA (885bp) protein (295aa)
AP endonuclease, family 2 n=2 Tax=Clostridiales RepID=G9YVF8_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI77062.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
sugar phosphate isomerase/epimerase
L3_133_123G1_scaffold_143_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30116..31108
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YVF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35229.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_143_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31183..32202)
DNA (1020bp) protein (340aa)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1C8B7_9FIRM
Chlorophyll synthesis pathway, bchC {ECO:0000313|EMBL:EHO35228.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 102 in total

View Taxonomy