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L3_133_123G1_scaffold_163

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_163_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

3..1460
DNA (1458bp) protein (486aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Blautia producta RepID=UPI00037E0AA3
Uncharacterized protein {ECO:0000313|EMBL:CCZ34928.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_133_123G1_scaffold_163_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1680..2225
DNA (546bp) protein (182aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Clostridium sp. ASF502 RepID=N2ALR5_9CLOT
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EMZ27458.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_133_123G1_scaffold_163_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2284..3300
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Dorea sp. 5-2 RepID=R9NIS4_9FIRM
L3_133_123G1_scaffold_163_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3373..3714)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97511.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_133_123G1_scaffold_163_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3795..4058)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Dorea longicatena CAG:42 RepID=R7G584_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
30S ribosomal protein S20
L3_133_123G1_scaffold_163_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4234..5328
DNA (1095bp) protein (365aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridiales RepID=B0NAC8_CLOSV
L3_133_123G1_scaffold_163_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5432..6565
DNA (1134bp) protein (378aa)
Stage II sporulation protein P n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B985_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:EGG84684.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Stage II sporulation protein P (SpoIIP).
L3_133_123G1_scaffold_163_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6666..8588
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6MJB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85957.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_133_123G1_scaffold_163_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8621..10870
DNA (2250bp) protein (750aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3N2_9CLOT
L3_133_123G1_scaffold_163_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11036..11653
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80248.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_133_123G1_scaffold_163_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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11844..12614
DNA (771bp) protein (257aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31 3.6.3.30)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2I9_9FIRM
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CDC24936.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_133_123G1_scaffold_163_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12617..15280
DNA (2664bp) protein (888aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A1L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14397.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC-type Fe3+ transport system, permease component
L3_133_123G1_scaffold_163_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15391..16485
DNA (1095bp) protein (365aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
2-aminoethylphosphonate--pyruvate transaminase (EC:2.6.1.37)
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Clostridium sp. D5 RepID=F0Z033_9CLOT
L3_133_123G1_scaffold_163_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

16487..17254
DNA (768bp) protein (256aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKP5_9FIRM
hypothetical protein
L3_133_123G1_scaffold_163_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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17465..17932
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MMU3_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_133_123G1_scaffold_163_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17957..19141
DNA (1185bp) protein (395aa)
Transcription termination factor NusA n=2 Tax=Clostridiales RepID=B0NAD4_CLOSV
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
transcription elongation factor NusA
L3_133_123G1_scaffold_163_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19134..19406
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LJA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85950.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_133_123G1_scaffold_163_18
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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19393..19719
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6S6A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55495.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_133_123G1_scaffold_163_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19731..22382
DNA (2652bp) protein (884aa)
Translation initiation factor IF-2 n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B779_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
bacterial translation initiation factor 2 (bIF-2)
L3_133_123G1_scaffold_163_20
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22392..22763
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=2 Tax=Coprococcus RepID=C0B778_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ribosome-binding factor A
L3_133_123G1_scaffold_163_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22765..23724
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22629.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Exopolyphosphatase-related proteins
L3_133_123G1_scaffold_163_22
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23721..24635
DNA (915bp) protein (305aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3P0_9CLOT
L3_133_123G1_scaffold_163_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24671..25654
DNA (984bp) protein (328aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B996_9FIRM
L3_133_123G1_scaffold_163_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25771..26037
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B997_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
SSU ribosomal protein S15P
L3_133_123G1_scaffold_163_25
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26252..28348
DNA (2097bp) protein (699aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Coprococcus RepID=C0B771_9FIRM
L3_133_123G1_scaffold_163_26
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28462..29091
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WE84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07715.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_133_123G1_scaffold_163_27
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29216..29707)
DNA (492bp) protein (164aa)
Acetyltransferases n=1 Tax=Roseburia sp. CAG:303 RepID=R7IP20_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDE53063.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Acetyltransferases
L3_133_123G1_scaffold_163_28
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29879..30880
DNA (1002bp) protein (334aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. ASF502 RepID=N2ALK4_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:EMZ27403.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
stage III sporulation protein AA
L3_133_123G1_scaffold_163_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30871..31404
DNA (534bp) protein (178aa)
Putative stage III sporulation protein AB n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FS73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24804.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
spoIIIAB; stage III sporulation protein AB
L3_133_123G1_scaffold_163_30
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31424..31624
DNA (201bp) protein (67aa)
Stage III sporulation protein AC n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MEN7_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EOS69161.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
stage III sporulation protein AC
Displaying items 1-30 of 83 in total

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