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L3_133_123G1_scaffold_285

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_285_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..175
DNA (174bp) protein (58aa)
ntpD; V-type Na(+)-transporting ATPase D subunit (EC:3.6.3.15)
V-type ATP synthase subunit D n=3 Tax=Clostridiales RepID=H1CAU8_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_123G1_scaffold_285_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

288..2111
DNA (1824bp) protein (608aa)
Arylsulfatase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR2_9FIRM
Arylsulfatase {ECO:0000313|EMBL:EHM55351.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_133_123G1_scaffold_285_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2190..3215
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34260.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
helix-turn-helix domain-containing protein
L3_133_123G1_scaffold_285_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3264..5468)
DNA (2205bp) protein (735aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ftsH; cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR4_9FIRM
L3_133_123G1_scaffold_285_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5610..6470
DNA (861bp) protein (287aa)
rRNA methyltransferase (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=3 Tax=Clostridiales RepID=G9YKR6_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ERI73519.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_123G1_scaffold_285_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6539..8683
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55454.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8829..8984
DNA (156bp) protein (52aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR8_9FIRM
L3_133_123G1_scaffold_285_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9021..10706
DNA (1686bp) protein (562aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ftsH3; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAV4_9FIRM
L3_133_123G1_scaffold_285_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10763..11233)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CVF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73207.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_123G1_scaffold_285_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11328..12179)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34266.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_285_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12258..12734)
DNA (477bp) protein (159aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Clostridiales RepID=G9YW23_9FIRM
ybaK/ebsC protein
L3_133_123G1_scaffold_285_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12800..13840
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34268.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase M42 family protein
L3_133_123G1_scaffold_285_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14151..16223
DNA (2073bp) protein (691aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAV9_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EHO34269.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recJ; single-stranded-DNA-specific exonuclease RecJ
L3_133_123G1_scaffold_285_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16276..18489
DNA (2214bp) protein (738aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAW0_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EHO34270.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_285_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18777..18986
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YW18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34271.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_285_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18976..20184
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34272.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted ATP-grasp enzyme
L3_133_123G1_scaffold_285_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20181..20387
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34273.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_123G1_scaffold_285_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20380..21084
DNA (705bp) protein (235aa)
Aspartate racemase n=2 Tax=Clostridiales RepID=G9YW15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55466.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
aspartate racemase
L3_133_123G1_scaffold_285_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21282..22802
DNA (1521bp) protein (507aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CUB2_9CLOT
L3_133_123G1_scaffold_285_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22792..23616
DNA (825bp) protein (275aa)
Putative iron-sulfur cluster-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55468.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23672..24109
DNA (438bp) protein (146aa)
CBS domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DA74_9CLOT
CBS domain protein {ECO:0000313|EMBL:ERI76446.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
signal transduction protein
L3_133_123G1_scaffold_285_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24179..26005)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=2 Tax=Clostridiales RepID=G9YW11_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EHM39710.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
typA; GTP-binding protein TypA
L3_133_123G1_scaffold_285_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26728..28158)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33857.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
integrase family protein
L3_133_123G1_scaffold_285_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28180..28389)
DNA (210bp) protein (70aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB37_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EHO33858.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29330..30394
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33859.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phage-type endonuclease
L3_133_123G1_scaffold_285_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30412..32685
DNA (2274bp) protein (758aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RecD/TraA family helicase (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB39_9FIRM
L3_133_123G1_scaffold_285_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32710..33819
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33861.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33859..35649
DNA (1791bp) protein (597aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33862.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35649..35900
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33863.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_123G1_scaffold_285_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35977..36927
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33864.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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