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L3_133_123G1_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_298_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(513..2552)
DNA (2040bp) protein (680aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LHG8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM98342.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Protein of unknown function (DUF3352)./MORN repeat variant.
L3_133_123G1_scaffold_298_2
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2657..3238
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J1I7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14438.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_133_123G1_scaffold_298_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3266..4144
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JKK6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87349.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
DNA/RNA endonuclease G, NUC1
L3_133_123G1_scaffold_298_4
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4602..5639
DNA (1038bp) protein (346aa)
Aminodeoxychorismate lyase n=1 Tax=Bacteroides sp. D22 RepID=D7J1I5_9BACE
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EFI14436.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Predicted periplasmic solute-binding protein
L3_133_123G1_scaffold_298_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5723..7315
DNA (1593bp) protein (531aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits (EC:1.2.7.8)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M812_9BACE
L3_133_123G1_scaffold_298_6
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7319..7903
DNA (585bp) protein (195aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit beta n=8 Tax=Bacteroides RepID=C3QC39_9BACE
Indolepyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EFI14434.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_298_7
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7915..9222
DNA (1308bp) protein (436aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Phenylacetate-coenzyme A ligase n=2 Tax=Bacteroides RepID=C3QP47_9BACE
phenylacetate-coenzyme A ligase
L3_133_123G1_scaffold_298_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9313..9885
DNA (573bp) protein (191aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Xanthine phosphoribosyltransferase n=10 Tax=Bacteroides RepID=D6CX54_9BACE
L3_133_123G1_scaffold_298_9
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9903..10664)
DNA (762bp) protein (254aa)
4Fe-4S binding domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QP49_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEO53733.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L3_133_123G1_scaffold_298_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11023..11373)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=29 Tax=Bacteroides RepID=RL20_BACTN
LSU ribosomal protein L20P
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_133_123G1_scaffold_298_11
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11472..11669)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=18 Tax=Bacteroides RepID=D6CX50_9BACE
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
L3_133_123G1_scaffold_298_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11738..12349)
DNA (612bp) protein (204aa)
Translation initiation factor IF-3 n=4 Tax=Bacteroides RepID=D6CX49_9BACE
bacterial translation initiation factor 3 (bIF-3)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_133_123G1_scaffold_298_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12422..14362)
DNA (1941bp) protein (647aa)
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Threonine--tRNA ligase n=3 Tax=Bacteroides RepID=D6CX48_9BACE
L3_133_123G1_scaffold_298_14
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14445..16475)
DNA (2031bp) protein (677aa)
TPR domain protein n=1 Tax=Bacteroides sp. D22 RepID=D7J1H5_9BACE
TPR domain protein {ECO:0000313|EMBL:EFI14426.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Tetratricopeptide repeat.
L3_133_123G1_scaffold_298_15
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16552..17106)
DNA (555bp) protein (185aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Peptide deformylase n=10 Tax=Bacteroides RepID=D6CX46_9BACE
L3_133_123G1_scaffold_298_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17150..17566)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Putative Holliday junction resolvase n=4 Tax=Bacteroides RepID=C3QC29_9BACE
conserved hypothetical protein TIGR00250
L3_133_123G1_scaffold_298_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17642..18781)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9TAA9_BACOV
OmpA family protein {ECO:0000313|EMBL:KDS20406.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L3_133_123G1_scaffold_298_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19097..20065)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JKJ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87334.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_133_123G1_scaffold_298_19
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20091..21197)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UXB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87333.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_133_123G1_scaffold_298_20
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21281..22741)
DNA (1461bp) protein (487aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=5 Tax=Bacteroides RepID=C3QC25_9BACE
L3_133_123G1_scaffold_298_21
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22754..23662)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=6 Tax=Bacteroides RepID=C3QC24_9BACE
L3_133_123G1_scaffold_298_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23742..24350)
DNA (609bp) protein (203aa)
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Adenylyl-sulfate kinase n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CX40_9BACE
L3_133_123G1_scaffold_298_23
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24366..25919)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JKI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87329.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Di-and tricarboxylate transporters
L3_133_123G1_scaffold_298_24
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25931..26755)
DNA (825bp) protein (275aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EEZ03579.1}; EC=3.1.3.7 {ECO:0000313|EMBL:EEZ03579.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
3'(2'),5'-bisphosphate nucleotidase n=6 Tax=Bacteroides RepID=D6CX38_9BACE
L3_133_123G1_scaffold_298_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27007..27501)
DNA (495bp) protein (165aa)
Sporulation and cell division repeat protein n=1 Tax=Bacteroides sp. 2_1_22 RepID=D0TU01_9BACE
Cell division protein
Uncharacterized protein {ECO:0000313|EMBL:EDO12621.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_133_123G1_scaffold_298_26
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27617..28387)
DNA (771bp) protein (257aa)
Serine 3-dehydrogenase {ECO:0000313|EMBL:EEZ03576.1}; EC=1.1.1.276 {ECO:0000313|EMBL:EEZ03576.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Serine 3-dehydrogenase n=6 Tax=Bacteroides RepID=C3QC18_9BACE
Short-chain alcohol dehydrogenase of unknown specificity
L3_133_123G1_scaffold_298_27
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28588..28797
DNA (210bp) protein (70aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=A7LVB2_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO49501.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_133_123G1_scaffold_298_28
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28830..29192
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QC16_9BACE
Protein of unknown function (DUF1469).
Uncharacterized protein {ECO:0000313|EMBL:CBK66736.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_133_123G1_scaffold_298_29
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29196..29453
DNA (258bp) protein (86aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QC15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDM06393.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L3_133_123G1_scaffold_298_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29462..29854)
DNA (393bp) protein (131aa)
Uncharacterized conserved protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CX32_9BACE
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK66734.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Displaying items 1-30 of 62 in total

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