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L3_133_123G1_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_299_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

628..2103
DNA (1476bp) protein (492aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMR1_LACRL
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:EEN81339.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_123G1_scaffold_299_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2113..2685
DNA (573bp) protein (191aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=7 Tax=Lactobacillus rhamnosus RepID=B5QPH7_LACRH
pad1; putative aromatic acid decarboxylase
L3_133_123G1_scaffold_299_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2682..4073
DNA (1392bp) protein (464aa)
Sodium/sulphate symporter n=6 Tax=Lactobacillus rhamnosus RepID=C7TMR3_LACRL
sodium/sulfate symporter
Uncharacterized protein {ECO:0000313|EMBL:AGP75343.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4219..5127)
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JUS6_LACRH
LysR substrate binding domain protein {ECO:0000313|EMBL:EEN81336.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
bacterial regulatory helix-turn-helix, lysR family protein
L3_133_123G1_scaffold_299_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5148..5579
DNA (432bp) protein (144aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMR5_LACRL
hypothetical protein
Amino acid decarboxylase {ECO:0000313|EMBL:KIC97025.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_133_123G1_scaffold_299_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5642..6079)
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=4 Tax=Lactobacillus rhamnosus RepID=C7TMR6_LACRL
marR family protein
Regulatory protein, MarR {ECO:0000313|EMBL:AGP75346.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6212..7594
DNA (1383bp) protein (461aa)
Transporter, major facilitator superfamily MFS_1, EmrB/QacA family protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMR7_LACRL
H+ antiporter-2 family protein
MFS transporter {ECO:0000313|EMBL:KIC97027.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_133_123G1_scaffold_299_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7826..8554)
DNA (729bp) protein (243aa)
Class II aldolase/adducin domain protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TMR8_LACRL
class II Aldolase and Adducin N-terminal domain protein
Sugar aldolase {ECO:0000313|EMBL:KIC97028.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_133_123G1_scaffold_299_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8551..8787)
DNA (237bp) protein (79aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TMR9_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75349.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8780..10348)
DNA (1569bp) protein (523aa)
PTS system, galactitol-specific IIC component n=4 Tax=Lactobacillus rhamnosus RepID=C7TMS0_LACRL
PTS system sugar-specific permease component family protein
PTS system, galactitol-specific IIC component {ECO:0000313|EMBL:AGP75350.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10421..10741)
DNA (321bp) protein (107aa)
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EEN81329.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEN81329.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
PTS system, galactitol-specific IIB component n=8 Tax=Lactobacillus rhamnosus RepID=C7TMS1_LACRL
galactitol PTS, EIIB
L3_133_123G1_scaffold_299_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10763..11242)
DNA (480bp) protein (160aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EEN81328.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEN81328.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein n=2 Tax=Lactobacillus rhamnosus RepID=G7V0J4_LACRH
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein
L3_133_123G1_scaffold_299_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11448..12242
DNA (795bp) protein (265aa)
Fucose operon repressor, DeoR family n=4 Tax=Lactobacillus rhamnosus RepID=C7TMS3_LACRL
Glycerol-3-phosphate regulon repressor, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEN81327.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_123G1_scaffold_299_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12335..12598)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMS4_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81326.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_123G1_scaffold_299_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12879..13769)
DNA (891bp) protein (297aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Rhamnulose-1-phosphate aldolase n=3 Tax=Lactobacillus rhamnosus RepID=G7V0J6_LACRH
Rhamnulose-1-phosphate aldolase
L3_133_123G1_scaffold_299_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13798..15078)
DNA (1281bp) protein (427aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L-rhamnose isomerase n=8 Tax=Lactobacillus rhamnosus RepID=C7T7P6_LACRG
L-rhamnose isomerase
L3_133_123G1_scaffold_299_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15142..15456)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L-rhamnose mutarotase n=8 Tax=Lactobacillus rhamnosus RepID=C7TMS7_LACRL
L-rhamnose mutarotase
L3_133_123G1_scaffold_299_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15459..16937)
DNA (1479bp) protein (493aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01535}; L-rhamnulose 1-kinase {ECO:0000256|HAMAP-Rule:MF_01535}; Rhamnulose kinase {ECO:0000256|HAMAP-Rule:MF_01535}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Rhamnulokinase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMS8_LACRL
rhaB; rhamnulokinase
L3_133_123G1_scaffold_299_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16971..18323)
DNA (1353bp) protein (451aa)
Sugar transport protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QPK9_LACRH
major facilitator superfamily protein
Putative L-rhamnose permease RhaY {ECO:0000313|EMBL:AGP75359.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18446..19468
DNA (1023bp) protein (341aa)
Transcription regulator n=9 Tax=Lactobacillus rhamnosus RepID=B5QPL0_LACRH
bacterial regulatory helix-turn-helix s, AraC family protein
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEN81319.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_123G1_scaffold_299_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19661..20782
DNA (1122bp) protein (374aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EKS52138.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EKS52138.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Zn-dependent alcohol dehydrogenase n=8 Tax=Lactobacillus rhamnosus RepID=B5QPL1_LACRH
xylB; alcohol dehydrogenase
L3_133_123G1_scaffold_299_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20900..21280)
DNA (381bp) protein (127aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMT2_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75362.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21611..22276)
DNA (666bp) protein (222aa)
Lipoprotein, putative n=5 Tax=Lactobacillus rhamnosus RepID=B5QPL3_LACRH
lipoprotein
Lipoprotein {ECO:0000313|EMBL:KIC97044.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_133_123G1_scaffold_299_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22636..24318
DNA (1683bp) protein (561aa)
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEN81315.1}; EC=3.2.1.10 {ECO:0000313|EMBL:EEN81315.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Alpha,alpha-phosphotrehalase (GH13) n=5 Tax=Lactobacillus rhamnosus RepID=C7TMT4_LACRL
malL; oligo-1,6-glucosidase
L3_133_123G1_scaffold_299_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25080..27350)
DNA (2271bp) protein (757aa)
Subtilisin-like serine protease n=4 Tax=Lactobacillus rhamnosus RepID=C7TMT5_LACRL
Subtilisin-like serine protease {ECO:0000313|EMBL:AGP75366.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Subtilisin-like serine protease
L3_133_123G1_scaffold_299_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27365..28384)
DNA (1020bp) protein (340aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TMT6_LACRL
Uncharacterized protein {ECO:0000313|EMBL:EEN81311.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_133_123G1_scaffold_299_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28423..30348)
DNA (1926bp) protein (642aa)
Heparinase II/III-like n=2 Tax=Lactobacillus rhamnosus RepID=C7TMT7_LACRL
Oligohyaluronate lyase {ECO:0000313|EMBL:KIC97047.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
heparinase II/III-like
L3_133_123G1_scaffold_299_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30287..30634)
DNA (348bp) protein (116aa)
Preprotein translocase subunit YajC n=5 Tax=Lactobacillus rhamnosus RepID=C7TMT8_LACRL
Preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AGP75369.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_123G1_scaffold_299_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30634..31101)
DNA (468bp) protein (156aa)
PTS system N-acetylgalactosamine-and galactosamine-specific IIA component {ECO:0000313|EMBL:EKS52130.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS52130.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system, mannose-specific IIA component n=7 Tax=Lactobacillus rhamnosus RepID=C7TMT9_LACRL
pts; PTS system mannose-specific transporter subunit IIA
L3_133_123G1_scaffold_299_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31187..32038)
DNA (852bp) protein (284aa)
PTS system, mannose-specific IID component n=10 Tax=Lactobacillus rhamnosus RepID=C7TMU0_LACRL
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EEN81307.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
PTS system mannose/fructose/sorbose IID component family protein
Displaying items 1-30 of 55 in total

View Taxonomy