ggKbase home page

L3_133_123G1_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_316_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1679..1777
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UN17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17774.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_133_123G1_scaffold_316_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1808..4639
DNA (2832bp) protein (944aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5H3_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG18915.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
cell surface protein
L3_133_123G1_scaffold_316_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4752..5021
DNA (270bp) protein (90aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L7U3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17772.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_133_123G1_scaffold_316_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5014..6144
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z107_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14566.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_133_123G1_scaffold_316_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6152..7804
DNA (1653bp) protein (551aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5H0_BACVU
ABC transporter family protein {ECO:0000313|EMBL:KDS31606.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
ABC transporter ATP-binding protein
L3_133_123G1_scaffold_316_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7788..8702
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZPC8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS31607.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_133_123G1_scaffold_316_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8671..9138
DNA (468bp) protein (156aa)
Peptidase S24-like protein n=4 Tax=Bacteroides RepID=C6Z110_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76858.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_133_123G1_scaffold_316_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9166..10326)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7T8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17767.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_133_123G1_scaffold_316_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10380..10916
DNA (537bp) protein (179aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7T7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04294.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_123G1_scaffold_316_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10946..13681
DNA (2736bp) protein (912aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z113_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04293.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_123G1_scaffold_316_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13770..14432)
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Uracil-DNA glycosylase n=7 Tax=Bacteroides RepID=UNG_BACV8
uracil-DNA glycosylase
L3_133_123G1_scaffold_316_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14550..15590)
DNA (1041bp) protein (347aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=3 Tax=Bacteroides RepID=D4V5G3_BACVU
L3_133_123G1_scaffold_316_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16227..19451
DNA (3225bp) protein (1075aa)
TonB-dependent receptor plug domain protein n=5 Tax=Bacteroides RepID=D4V5G2_BACVU
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS56332.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_133_123G1_scaffold_316_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19471..20973
DNA (1503bp) protein (501aa)
SusD family protein n=4 Tax=Bacteroides RepID=C6Z121_9BACE
hypothetical protein
SusD family protein {ECO:0000313|EMBL:EET14580.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_133_123G1_scaffold_316_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21106..22746
DNA (1641bp) protein (547aa)
Glycoside hydrolase family 33, candidate sialidase n=5 Tax=Bacteroides RepID=A6L7T1_BACV8
sialidase
Glycoside hydrolase family 33, candidate sialidase {ECO:0000313|EMBL:ABR41745.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_133_123G1_scaffold_316_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22750..24756
DNA (2007bp) protein (669aa)
Glycoside hydrolase family 20 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7T0_BACV8
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:KDS31617.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycoside hydrolase
L3_133_123G1_scaffold_316_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24758..25423
DNA (666bp) protein (222aa)
GDSL-like protein n=4 Tax=Bacteroides RepID=C6Z124_9BACE
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:KDS56336.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
sialate O-acetylesterase
L3_133_123G1_scaffold_316_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25420..27483
DNA (2064bp) protein (688aa)
GDSL-like protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5F7_BACVU
GDSL-like protein {ECO:0000313|EMBL:EFG18899.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
sialate O-acetylesterase
L3_133_123G1_scaffold_316_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27510..30077
DNA (2568bp) protein (856aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5F6_BACVU
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG18898.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L3_133_123G1_scaffold_316_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30094..32418
DNA (2325bp) protein (775aa)
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase n=2 Tax=Bacteroides vulgatus RepID=A6L7S6_BACV8
beta-N-acetylhexosaminidase
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ABR41740.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_133_123G1_scaffold_316_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32509..33732
DNA (1224bp) protein (408aa)
Cyclically-permuted mutatrotase family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5F4_BACVU
Cyclically-permuted mutatrotase family protein {ECO:0000313|EMBL:EFG18896.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_133_123G1_scaffold_316_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33729..35783
DNA (2055bp) protein (685aa)
Glycosyl hydrolase family 20, catalytic domain protein n=6 Tax=Bacteroides RepID=C6Z129_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76873.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
beta-N-acetylhexosaminidase
L3_133_123G1_scaffold_316_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35810..38062
DNA (2253bp) protein (751aa)
Glycoside hydrolase family 92 n=6 Tax=root RepID=E5UWN7_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFG18894.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L3_133_123G1_scaffold_316_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38065..40569
DNA (2505bp) protein (835aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5F1_BACVU
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG18893.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-galactosidase
L3_133_123G1_scaffold_316_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40745..41908
DNA (1164bp) protein (388aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
N-acetylglucosamine-6-phosphate deacetylase n=4 Tax=Bacteroides vulgatus RepID=A6L7S1_BACV8
N-acetylglucosamine-6-phosphate deacetylase
L3_133_123G1_scaffold_316_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42132..42785)
DNA (654bp) protein (218aa)
ABC-type multidrug transport system, ATPase component n=4 Tax=Bacteroides vulgatus RepID=A6L7S0_BACV8
multidrug ABC transporter ATPase
Uncharacterized protein {ECO:0000313|EMBL:EOS04272.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_123G1_scaffold_316_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42782..43711)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7R9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04271.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_123G1_scaffold_316_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43788..44366)
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04270.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_123G1_scaffold_316_29
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44379..44852)
DNA (474bp) protein (158aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=D4V4K6_BACVU
RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17746.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_133_123G1_scaffold_316_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45004..45675)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04268.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 45 in total

View Taxonomy