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L3_133_123G1_scaffold_342

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_342_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..82
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L3_133_123G1_scaffold_342_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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202..843
DNA (642bp) protein (214aa)
S-formylglutathione hydrolase {ECO:0000313|EMBL:CDK83413.1}; EC=3.1.2.12 {ECO:0000313|EMBL:CDK83413.1};; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
S-formylglutathione hydrolase FrmB n=104 Tax=Escherichia RepID=SFGH1_ECOLC
frmB; putative esterase
L3_133_123G1_scaffold_342_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1069..1608)
DNA (540bp) protein (180aa)
Nucleoprotein/polynucleotide-associated enzyme n=6 Tax=Escherichia RepID=F4SIW9_ECOLX
yaiL; nucleoprotein/polynucleotide-associated enzyme
Nucleoprotein/polynucleotide-associated enzyme {ECO:0000313|EMBL:AHY69016.1}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H28 str. RM12581.;"
L3_133_123G1_scaffold_342_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1710..2921)
DNA (1212bp) protein (404aa)
Putative 3-hydroxyphenylpropionic acid transporter n=122 Tax=Escherichia RepID=MHPT_ECOLI
3-hydroxyphenylpropionic transporter MhpT
Uncharacterized protein {ECO:0000313|EMBL:AEE55050.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_133_123G1_scaffold_342_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3196..4209)
DNA (1014bp) protein (338aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
4-hydroxy-2-oxovalerate aldolase n=550 Tax=Enterobacteriaceae RepID=HOA_ECO24
4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase
L3_133_123G1_scaffold_342_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4206..5156)
DNA (951bp) protein (317aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=2 Tax=Escherichia coli RepID=L2VAC8_ECOLX
L3_133_123G1_scaffold_342_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5153..5962)
DNA (810bp) protein (270aa)
2-keto-4-pentenoate hydratase {ECO:0000256|HAMAP-Rule:MF_01655}; EC=4.2.1.80 {ECO:0000256|HAMAP-Rule:MF_01655};; 2-hydroxypentadienoic acid hydratase {ECO:0000256|HAMAP-Rule:MF_01655}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
mhpD; 2-keto-4-pentenoate hydratase (EC:4.2.1.80)
2-keto-4-pentenoate hydratase n=71 Tax=Escherichia coli RepID=D8E1B0_ECOLX
L3_133_123G1_scaffold_342_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5972..6838)
DNA (867bp) protein (289aa)
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; EC=3.7.1.14 {ECO:0000256|HAMAP-Rule:MF_01654};; 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase n=464 Tax=Enterobacteriaceae RepID=MHPC_ECO24
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase
L3_133_123G1_scaffold_342_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6856..7800)
DNA (945bp) protein (315aa)
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; EC=1.13.11.16 {ECO:0000256|HAMAP-Rule:MF_01653};; 3-carboxyethylcatechol 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase n=658 Tax=Enterobacteriaceae RepID=MHPB_ECO57
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase
L3_133_123G1_scaffold_342_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7802..9466)
DNA (1665bp) protein (555aa)
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652}; Short=3-HCI hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; Short=3-HPP hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; EC=1.14.13.127 {ECO:0000256|HAMAP-Rule:MF_01652};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase n=8 Tax=Escherichia coli RepID=B1J0T2_ECOLC
mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase
L3_133_123G1_scaffold_342_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9543..10490
DNA (948bp) protein (316aa)
DNA-binding transcriptional activator, 3HPP-binding n=3 Tax=Escherichia coli RepID=L2VAC3_ECOLX
DNA-binding transcriptional activator, 3HPP-binding {ECO:0000313|EMBL:ELC11472.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
mhpR; DNA-binding transcriptional activator MhpR
L3_133_123G1_scaffold_342_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10558..11649
DNA (1092bp) protein (364aa)
Transcriptional regulator, LacI family n=120 Tax=Proteobacteria RepID=B1J0T4_ECOLC
lacI; lac repressor
Lactose operon repressor {ECO:0000313|EMBL:EOW27694.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L3_133_123G1_scaffold_342_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11772..14846
DNA (3075bp) protein (1025aa)
Beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613}; Short=Beta-gal {ECO:0000256|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|HAMAP-Rule:MF_01687}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
Beta-galactosidase n=14 Tax=Escherichia coli RepID=K3KSV2_ECOLX
beta-D-galactosidase
L3_133_123G1_scaffold_342_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14898..16151
DNA (1254bp) protein (418aa)
Lactose permease n=741 Tax=Enterobacteriaceae RepID=LACY_ECOLI
lacY; galactoside permease
Lactose permease {ECO:0000313|EMBL:EHX36653.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L3_133_123G1_scaffold_342_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16223..16828
DNA (606bp) protein (202aa)
Galactoside O-acetyltransferase n=2 Tax=Escherichia coli RepID=L2V8A1_ECOLX
Galactoside O-acetyltransferase {ECO:0000313|EMBL:ELC11468.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
lacA; galactoside O-acetyltransferase
L3_133_123G1_scaffold_342_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16931..18112)
DNA (1182bp) protein (394aa)
Cyanate transporter CynX n=1 Tax=Escherichia coli UMEA 3150-1 RepID=U0CXG0_ECOLX
cyanate transporter
Putative cyanate transporter {ECO:0000313|EMBL:AJF55114.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1303.;"
L3_133_123G1_scaffold_342_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18118..18450)
DNA (333bp) protein (111aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Cyanate hydratase n=2 Tax=Escherichia coli RepID=L2V7J3_ECOLX
cynS; cyanate hydratase
L3_133_123G1_scaffold_342_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18459..18587)
DNA (129bp) protein (43aa)
cyanate hydratase (EC:4.2.1.104)
Cyanate hydratase n=2 Tax=Escherichia coli RepID=L2VAL2_ECOLX
Cyanate hydratase {ECO:0000313|EMBL:ESK03154.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_133_123G1_scaffold_342_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18618..19277)
DNA (660bp) protein (220aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Carbonic anhydrase 1 n=722 Tax=Bacteria RepID=CYNT_ECO57
carbonate dehydratase
L3_133_123G1_scaffold_342_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19386..20285
DNA (900bp) protein (300aa)
HTH-type transcriptional regulator CynR n=124 Tax=Escherichia RepID=CYNR_ECOLI
DNA-binding transcriptional regulator CynR
HTH-type transcriptional regulator CynR {ECO:0000313|EMBL:EIF86975.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L3_133_123G1_scaffold_342_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20622..21905)
DNA (1284bp) protein (428aa)
N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
Cytosine deaminase n=2 Tax=Escherichia coli RepID=L2VAB5_ECOLX
Cytosine deaminase {ECO:0000313|EMBL:ESK03157.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_133_123G1_scaffold_342_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21895..23154)
DNA (1260bp) protein (420aa)
Cytosine permease n=515 Tax=Escherichia RepID=CODB_ECOL6
codB; cytosine permease
Cytosine permease {ECO:0000313|EMBL:KEN92577.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_133_123G1_scaffold_342_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23484..25370)
DNA (1887bp) protein (629aa)
Propionate--CoA ligase {ECO:0000313|EMBL:EII48017.1}; EC=6.2.1.17 {ECO:0000313|EMBL:EII48017.1};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Propionate--coA ligase n=94 Tax=Escherichia RepID=E3PER2_ECOH1
propionate--coA ligase
L3_133_123G1_scaffold_342_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25410..26861)
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:KDY15199.1}; EC=4.2.1.79 {ECO:0000313|EMBL:KDY15199.1};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
2-methylcitrate dehydratase n=173 Tax=cellular organisms RepID=PRPD_ECOLI
2-methylcitrate dehydratase
L3_133_123G1_scaffold_342_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26895..28064)
DNA (1170bp) protein (390aa)
prpC; 2-methylcitrate synthase (EC:2.3.3.1)
2-methylcitrate synthase n=136 Tax=Escherichia RepID=PRPC_ECOLI
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L3_133_123G1_scaffold_342_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28411..29301)
DNA (891bp) protein (297aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
Methylisocitrate lyase n=158 Tax=Escherichia RepID=PRPB_ECOLI
prpB; 2-methylisocitrate lyase
L3_133_123G1_scaffold_342_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29540..31126
DNA (1587bp) protein (529aa)
Proprionate catabolism activator, Fis family n=3 Tax=Escherichia coli RepID=B1J0U8_ECOLC
Propionate catabolism operon regulatory protein PrpR {ECO:0000313|EMBL:EZJ79554.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
Fis family proprionate catabolism activator
L3_133_123G1_scaffold_342_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31224..31499)
DNA (276bp) protein (92aa)
Uncharacterized protein YahO n=353 Tax=Enterobacteriaceae RepID=YAHO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV36147.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L3_133_123G1_scaffold_342_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31685..32317
DNA (633bp) protein (211aa)
Homoserine/threonine efflux pump n=31 Tax=Escherichia RepID=B1J0V0_ECOLC
yahN; neutral amino-acid efflux system
Homoserine/Threonine efflux protein {ECO:0000313|EMBL:EFJ88089.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_133_123G1_scaffold_342_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32334..32579)
DNA (246bp) protein (82aa)
Uncharacterized protein YahM n=50 Tax=Escherichia coli RepID=YAHM_ECOLI
yahM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESE01151.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
Displaying items 1-30 of 47 in total

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