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L3_133_123G1_scaffold_346

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_123G1_scaffold_346_1
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..373
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Porphyromonadaceae RepID=F9Z9S3_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB12021.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
L3_133_123G1_scaffold_346_2
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

524..2077
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S3C8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL86907.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
putative protein involved in recombination
L3_133_123G1_scaffold_346_3
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2193..2417
DNA (225bp) protein (75aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EBF9_9BACE
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDE00060.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
helix-turn-helix domain-containing protein
L3_133_123G1_scaffold_346_4
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2417..3556
DNA (1140bp) protein (380aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AVQ6_9BACT
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EHJ41497.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
DNA-cytosine methyltransferase
L3_133_123G1_scaffold_346_5
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3553..4623
DNA (1071bp) protein (357aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
Cytosine-specific methyltransferase n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AVQ5_9BACT
DNA-cytosine methyltransferase
L3_133_123G1_scaffold_346_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4625..6316
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Z7F1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA80426.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
L3_133_123G1_scaffold_346_7
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6353..8596
DNA (2244bp) protein (748aa)
restriction endonuclease LlaJI n=1 Tax=Bacteroides gallinarum RepID=UPI00036EC775
Uncharacterized protein {ECO:0000313|EMBL:EIY70821.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
Restriction endonuclease, type II, LlaJI
L3_133_123G1_scaffold_346_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8621..11911
DNA (3291bp) protein (1097aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Z5U7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ20601.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
hypothetical protein
L3_133_123G1_scaffold_346_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11945..13417
DNA (1473bp) protein (491aa)
Divergent AAA domain protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IXB3_9BACE
Divergent AAA domain protein {ECO:0000313|EMBL:EFI06811.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
putative transcriptional regulator
L3_133_123G1_scaffold_346_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13433..13936
DNA (504bp) protein (168aa)
DNA mismatch endonuclease Vsr n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FMD2_BACFG
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EKA80421.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
DNA mismatch endonuclease Vsr
L3_133_123G1_scaffold_346_11
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13967..16618
DNA (2652bp) protein (884aa)
PHP domain protein n=1 Tax=Prevotella denticola CRIS 18C-A RepID=F0H456_9BACT
Histidinol phosphatase {ECO:0000313|EMBL:KGF33850.1}; TaxID=1401074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis DNF00853.;"
hypothetical protein
L3_133_123G1_scaffold_346_12
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17016..18287)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20231.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
peptidase family M1
L3_133_123G1_scaffold_346_13
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18465..19904
DNA (1440bp) protein (480aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EFA20232.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFA20232.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacteroides sp. D20 RepID=D2EX46_9BACE
L3_133_123G1_scaffold_346_14
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20002..20913)
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family n=6 Tax=Bacteroides RepID=A7UYY0_BACUN
AraC family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:EFV27502.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
transcriptional regulator
L3_133_123G1_scaffold_346_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21073..22242
DNA (1170bp) protein (390aa)
Efflux transporter n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6N4_9BACE
Efflux transporter {ECO:0000313|EMBL:EFV27503.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
multidrug resistance protein
L3_133_123G1_scaffold_346_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22313..25459
DNA (3147bp) protein (1049aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=2 Tax=Bacteroides uniformis RepID=I8ZJ10_BACUN
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY74982.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
multidrug resistance protein MexB
L3_133_123G1_scaffold_346_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25502..26908
DNA (1407bp) protein (469aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PVI9_9BACE
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EFA20237.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
multidrug resistance protein
L3_133_123G1_scaffold_346_18
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27016..28512)
DNA (1497bp) protein (499aa)
Succinate CoA transferase {ECO:0000313|EMBL:EFA20238.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFA20238.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
succinate CoA transferase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Bacteroides sp. D20 RepID=D2EX52_9BACE
L3_133_123G1_scaffold_346_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28586..28966)
DNA (381bp) protein (127aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7UYY6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY74979.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_133_123G1_scaffold_346_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29361..30734
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=root RepID=A7UYY7_BACUN
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_133_123G1_scaffold_346_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30838..31341)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2M3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10508.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_133_123G1_scaffold_346_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31714..32613
DNA (900bp) protein (300aa)
Methyltransferase domain-containing protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6P1_9BACE
Methyltransferase domain protein {ECO:0000313|EMBL:KDS48115.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
methyltransferase type 12
L3_133_123G1_scaffold_346_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32696..33571
DNA (876bp) protein (292aa)
Cell division protein FtsX n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6P2_9BACE
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
cell division protein FtsX
L3_133_123G1_scaffold_346_24

Not on your lists

33655..33894
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=root RepID=K1TNU5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC69269.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_123G1_scaffold_346_25
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34051..34842
DNA (792bp) protein (264aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
putative undecaprenol kinase (EC:2.7.1.66)
Undecaprenyl-diphosphatase n=4 Tax=Bacteroides RepID=A7UYZ3_BACUN
L3_133_123G1_scaffold_346_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34907..35665
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=6 Tax=root RepID=I8ZJ01_BACUN
L3_133_123G1_scaffold_346_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35782..36840
DNA (1059bp) protein (353aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=7 Tax=root RepID=A7UYZ5_BACUN
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_133_123G1_scaffold_346_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36843..37319
DNA (477bp) protein (159aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=4 Tax=Bacteroides RepID=A7UYZ6_BACUN
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase {ECO:0000313|EMBL:EFV27516.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_133_123G1_scaffold_346_29
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37621..38913
DNA (1293bp) protein (431aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=3 Tax=Bacteroides RepID=A7UYZ8_BACUN
L3_133_123G1_scaffold_346_30
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39018..40964)
DNA (1947bp) protein (649aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX65_9BACE
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 40 in total

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