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LAC_NA06_curatedSub20_scaffold_247

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_NA06_curatedSub20_scaffold_247_1
unknown

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comp(2..754)
DNA (753bp) protein (251aa)

This feature has no annotations

LAC_NA06_curatedSub20_scaffold_247_2
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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877..2199
DNA (1323bp) protein (441aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;"
Type II secretory pathway, pullulanase PulA glycosidase Tax=Gardnerella vaginalis AMD RepID=D6SYA1_GARVA
Na-Ca exchanger/integrin-beta4
LAC_NA06_curatedSub20_scaffold_247_3
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(2204..3316)
DNA (1113bp) protein (371aa)
O-succinylbenzoate synthase bin=GWD2_Chloroflexi_49_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
mandelate racemase/muconate lactonizing protein
Tax=CG_Anaero_03
LAC_NA06_curatedSub20_scaffold_247_4
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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comp(3316..3834)
DNA (519bp) protein (173aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_247_5
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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comp(3988..5304)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYP1_ANATU
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_247_6
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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5370..6947
DNA (1578bp) protein (526aa)
Hypothetical membrane protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_247_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6947..7558
DNA (612bp) protein (204aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_247_8
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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7555..8961
DNA (1407bp) protein (469aa)
Hypothetical membrane protein bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_247_9
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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9005..10201
DNA (1197bp) protein (399aa)
hypothetical protein
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_247_10
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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10273..12162
DNA (1890bp) protein (630aa)
Selenocysteine-specific elongation factor bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
selB; selenocysteine-specific elongation factor
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_247_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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12210..12542
DNA (333bp) protein (111aa)
protein of unknown function DUF433 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
LAC_NA06_curatedSub20_scaffold_247_12

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12729..12902
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I630_CALAS
Marine sediment metagenome DNA, contig: S01H1_S29951 {ECO:0000313|EMBL:GAG39254.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
LAC_NA06_curatedSub20_scaffold_247_13
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(13014..15134)
DNA (2121bp) protein (707aa)
Phosphoribulokinase/uridine kinase bin=GWB2_Chloroflexi_49_20 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
phosphoribulokinase/uridine kinase
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_247_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(15136..16203)
DNA (1068bp) protein (356aa)
putative 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_247_15
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

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comp(16316..16948)
DNA (633bp) protein (211aa)
Phosphoglycerate mutase bin=GWB2_Chloroflexi_49_20 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
phosphoglycerate mutase
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
LAC_NA06_curatedSub20_scaffold_247_16
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(16945..19002)
DNA (2058bp) protein (686aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N237_ANATU
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_247_17
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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comp(18999..19952)
DNA (954bp) protein (318aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N238_ANATU
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_247_18
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

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comp(19977..20339)
DNA (363bp) protein (121aa)
Glycerol-3-phosphate dehydrogenase bin=GWB2_Chloroflexi_49_20 species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
FAD dependent oxidoreductase family protein
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
Displaying 18 items

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