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LAC_acetylene_scaffold_20334

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_20334_1
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(1..1041)
DNA (1041bp) protein (347aa)
Transposase, IS4-like n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KKX8_ACHPJ
Transposase, IS4-like
Transposase, IS4-like {ECO:0000313|EMBL:CCV64353.1}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
LAC_acetylene_scaffold_20334_2
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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1210..3036
DNA (1827bp) protein (609aa)
Putative uncharacterized protein id=3239302 bin=GWF2_Firmicute_57_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
yheS_1; putative ABC transporter ATP-binding protein YheS
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_3
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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3121..3636
DNA (516bp) protein (172aa)
NUDIX hydrolase id=3239295 bin=GWF2_Firmicute_57_13 species=Shewanella frigidimarina genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
NUDIX hydrolase
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_20334_4
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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3672..5378
DNA (1707bp) protein (569aa)
argS; Arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=3239288 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_5
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

5415..7274
DNA (1860bp) protein (620aa)
Putative multidrug export ATP-binding/permease protein (EC:3.6.3.-)
ABC transporter related protein id=3239285 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_6
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

7264..9150
DNA (1887bp) protein (629aa)
ABC transporter related protein id=3239280 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
putative ABC transporter ATP-binding protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_trna_1
unknown

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9235..9318
DNA (84bp)
transferRNA Leu
LAC_acetylene_scaffold_20334_7
unknown

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9401..9688
DNA (288bp) protein (96aa)

This feature has no annotations

LAC_acetylene_scaffold_20334_8
unknown

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9761..9931
DNA (171bp) protein (57aa)

This feature has no annotations

LAC_acetylene_scaffold_20334_9
unknown

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9949..10158
DNA (210bp) protein (70aa)

This feature has no annotations

LAC_acetylene_scaffold_20334_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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10190..11323
DNA (1134bp) protein (378aa)
Diguanylate cyclase id=3382634 bin=GWF2_Tenericutes_35_184 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
diguanylate cyclase
Tax=BJP_IG2102_Acholeplasmatales_34_18
LAC_acetylene_scaffold_20334_11
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

11404..12705
DNA (1302bp) protein (434aa)
Integral membrane protein id=4179214 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
predicted O-antigen ligase like membrane protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12765..14159
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5D6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF68811.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MATE efflux family protein
LAC_acetylene_scaffold_20334_13
unknown

Not on your lists

comp(14175..15242)
DNA (1068bp) protein (356aa)

This feature has no annotations

LAC_acetylene_scaffold_20334_14
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(15245..15775)
DNA (531bp) protein (177aa)
RNA polymerase sigma-70 factor, ECF subfamily id=3239264 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_20334_15
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(15832..16908)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=3239261 bin=GWF2_Firmicute_57_13 species=Daphnia pulex genus=Daphnia taxon_order=Diplostraca taxon_class=Branchiopoda phylum=Arthropoda tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_16
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

17060..17851
DNA (792bp) protein (264aa)
id=3239259 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_17
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

17863..19479
DNA (1617bp) protein (539aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II id=3239258 bin=GWF2_Firmicute_57_13 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
AMP-dependent synthetase and ligase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_18
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(19527..20099)
DNA (573bp) protein (191aa)
Transcriptional regulator id=3239256 bin=GWF2_Firmicute_57_13 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
transcriptional regulator
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_20334_19
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

20457..21755
DNA (1299bp) protein (433aa)
id=3239254 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_20334_20
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

22154..23848
DNA (1695bp) protein (565aa)
Transposase DDE domain protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FCW0_9BACT
Transposase DDE domain protein {ECO:0000313|EMBL:ERJ10860.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
transposase
Displaying 21 items

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