ggKbase home page

LAC_acetylene_scaffold_17498

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_17498_1

Not on your lists

3..986
DNA (984bp) protein (328aa)
histidinol dehydrogenase (EC:1.1.1.23)
Uncharacterized protein n=1 Tax=Phytophthora ramorum RepID=H3HCE9_PHYRM
Uncharacterized protein {ECO:0000313|EMBL:KKO11200.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LAC_acetylene_scaffold_17498_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(910..2409)
DNA (1500bp) protein (500aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq id=3219899 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_17498_3
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2482..4530
DNA (2049bp) protein (683aa)
ATP-dependent DNA helicase RecG n=1 Tax=Treponema primitia RepID=UPI0002555300
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AEJ20090.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_17498_4
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(4579..5097)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Leptospira interrogans serovar Muenchen str. Brem 129 RepID=M6ITW3_LEPIR
hypothetical protein
Tax=BJP_IG2069_Spirochaetales_48_31
LAC_acetylene_scaffold_17498_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5164..5943)
DNA (780bp) protein (260aa)
Methyltransferase small id=3948008 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_17498_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5963..6571)
DNA (609bp) protein (203aa)
Methyltransferase small id=3948008 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
methyltransferase small
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_17498_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6552..7115)
DNA (564bp) protein (188aa)
Elongation factor P id=3173615 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Elongation factor P
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_17498_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(7263..8279)
DNA (1017bp) protein (339aa)
Lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase id=3016538 bin=GWF1_Spirochaetes_60_12 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_17498_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8297..8779
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X6R9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51777.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase (AAA+ superfamily)
LAC_acetylene_scaffold_17498_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

8880..9131
DNA (252bp) protein (84aa)
Prevent-host-death family protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F377_SPICH
prevent-host-death family protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_17498_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9131..9412
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F378_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ20404.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_17498_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9509..10690)
DNA (1182bp) protein (394aa)
Putative iron-sulfur protein id=3948002 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
iron-sulfur cluster binding protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_17498_13
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(10700..12103)
DNA (1404bp) protein (468aa)
Serine hydroxymethyltransferase id=3129492 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
glycine/serine hydroxymethyltransferase
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_17498_14
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12090..13727)
DNA (1638bp) protein (546aa)
Transglutaminase domain-containing protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LNQ4_TREBD
transglutaminase domain-containing protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:AEE16889.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
LAC_acetylene_scaffold_17498_15
unknown

Not on your lists

comp(13731..14306)
DNA (576bp) protein (192aa)
hypothetical protein
LAC_acetylene_scaffold_17498_16
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(14303..14923)
DNA (621bp) protein (207aa)
Putative transmembrane anti-sigma factor id=3016547 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_17498_17
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14913..15506)
DNA (594bp) protein (198aa)
RNA polymerase sigma-24 factor n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YA63_TREAZ
RNA polymerase sigma-24 factor
RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEF82800.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
LAC_acetylene_scaffold_17498_18
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15568..17007)
DNA (1440bp) protein (480aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Cysteine--tRNA ligase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EX79_SPICH
LAC_acetylene_scaffold_17498_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

17070..18005
DNA (936bp) protein (312aa)
UDP-N-acetylenolpyruvoylglucosamine reductase id=3822738 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_17498_20
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

18106..20592
DNA (2487bp) protein (829aa)
Kef-type K+ transport system, membrane component id=4033464 bin=GWF2_Lentisphaerae_57_35 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Kef-type K+ transport system membrane protein
Tax=GWF2_Lentisphaerae_57_35_curated
LAC_acetylene_scaffold_17498_21
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(20758..27519)
DNA (6762bp) protein (2254aa)
OmpA/MotB domain protein id=1284391 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
OmpA/MotB domain-containing protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_17498_22

Not on your lists

comp(27674..28810)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZY1_SPICH
Uncharacterized protein {ECO:0000313|EMBL:CDL65445.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
hypothetical protein
Displaying 22 items

View Taxonomy