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LAC_acetylene_scaffold_15974

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_15974_1
Pseudothermotoga lettingae, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(2..1084)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F6E2_THELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV33726.1}; Flags: Precursor;; TaxID=416591 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC; 107922 / TMO) (Thermotoga lettingae).;"
LAC_acetylene_scaffold_15974_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1098..1649)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PX89_9FUSO
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_15974_3
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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1921..3870
DNA (1950bp) protein (650aa)
AMP-dependent synthetase and ligase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7S6_SPISS
AMP-dependent synthetase and ligase
Tax=RBG_13_Spirochaetes_68_11_curated
LAC_acetylene_scaffold_15974_4
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

3909..5846
DNA (1938bp) protein (646aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase id=3551637 bin=GWF2_Bacteroidetes_49_14 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=RBG_13_Spirochaetes_68_11_curated
LAC_acetylene_scaffold_15974_5
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5969..7636
DNA (1668bp) protein (556aa)
Peptidase M20 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG61_MEISD
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ADH61982.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
LAC_acetylene_scaffold_15974_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7653..8348
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI0003489B68
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:AEP11567.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
LAC_acetylene_scaffold_15974_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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8427..9128
DNA (702bp) protein (234aa)
Uridylate kinase id=3765253 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
pyrH; uridylate kinase
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_15974_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9312..9986
DNA (675bp) protein (225aa)
Uncharacterized protein id=3592223 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_15974_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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10000..10623
DNA (624bp) protein (208aa)
Channel protein, hemolysin III family id=2182837 bin=GWB2_Chloroflexi_49_20 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hemolysin III family channel protein
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_acetylene_scaffold_15974_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10637..12133)
DNA (1497bp) protein (499aa)
alpha,alpha-trehalase (EC:3.2.1.28)
Alpha,alpha-trehalase id=3592226 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_15974_11
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(12237..13511)
DNA (1275bp) protein (425aa)
Iron only hydrogenase large subunit id=1274406 bin=GWE1_Spirochaete_60_18 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hydrogenase large subunit domain protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_15974_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13556..13984)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LW65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63050.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
putative anti-sigma regulatory factor
LAC_acetylene_scaffold_15974_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(13995..14354)
DNA (360bp) protein (120aa)
DRTGG domain-containing protein id=3592240 bin=GWB1_Spirochaetes_59_5 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
drtgg domain-containing protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_15974_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(14383..15009)
DNA (627bp) protein (209aa)
Recombination protein RecR id=3592244 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Recombination protein recR
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_15974_15
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(15009..15356)
DNA (348bp) protein (116aa)
Nucleoid-associated protein Trad_2375 id=3592246 bin=GWB1_Spirochaetes_59_5 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
YbaB/EbfC family DNA-binding protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_15974_16
unknown

Not on your lists

comp(15368..15439)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 16 items

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