ggKbase home page

LAC_acetylene_scaffold_38657

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_38657_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(37..414)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YPH0_TREPZ
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_38657_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(411..1517)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein id=3427132 bin=GWB1_Spirochaetes_59_5 species=Clostridium asparagiforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1514..2215)
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family id=3427136 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(2226..3344)
DNA (1119bp) protein (373aa)
Tobe domain family id=3427138 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3346..5139)
DNA (1794bp) protein (598aa)
ABC transporter, permease protein id=3427140 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5173..6270)
DNA (1098bp) protein (366aa)
Conserved hypothetical ABC transporter periplasmic solute-binding protein id=3427142 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative ABC transporter periplasmic solute-binding protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_7
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6423..8189
DNA (1767bp) protein (589aa)
lipid A export ATP-binding/permease MsbA (EC:3.6.3.-)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AEF85155.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEF85155.1};; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
multidrug ABC transporter ATP-binding protein n=1 Tax=Treponema primitia RepID=UPI00025550C3
LAC_acetylene_scaffold_38657_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(8196..8843)
DNA (648bp) protein (216aa)
id=4101646 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_38657_9
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

9024..10811
DNA (1788bp) protein (596aa)
ABC transporter related protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BER6_CHLPD
ABC transporter related
Tax=RBG_13_Chloroflexi_48_10_curated
LAC_acetylene_scaffold_38657_10
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

10801..12627
DNA (1827bp) protein (609aa)
ABC transporter related protein id=4942337 bin=GWC2_Chloroflexi_49_37 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter
Tax=RBG_16_Chloroflexi_48_8_curated
LAC_acetylene_scaffold_38657_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12744..13709
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037D0705
molecular chaperone DnaJ
Molecular chaperone DnaJ {ECO:0000313|EMBL:AIZ62656.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
LAC_acetylene_scaffold_38657_12
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13706..14062
DNA (357bp) protein (119aa)
MerR family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6C89D
transcriptional regulator, MerR family
Tax=CG_Maritim_01
Displaying 12 items

View Taxonomy