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LAC_acetylene_scaffold_25361_11

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(10398..10949)

Top 3 Functional Annotations

Value Algorithm Source
rnhA; ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 166.0
  • Bit_score: 171
  • Evalue 1.60e-40
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 172.0
  • Bit_score: 171
  • Evalue 6.30e-40
Ribonuclease H n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AG29_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 172.0
  • Bit_score: 171
  • Evalue 4.50e-40

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Taxonomy

Magnetospirillum sp. SO-1 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGAGAACCGCCGGTTGCCCGCGAAGCCCTTTTCTGCCATAGTAGCGGCGATGCAGGAAATTATCATTCACACGGACGGCGGCTGCTCGGGCAACCCCGGTCCAGGAGGCTGGGCCTATGTCATGCGCTACGCCGAAAGGCTACGCGAGGACAGCGGCTGGGAGCCCGATACGACAAACAACAGGATGGAACTCAGGGCCGTCATAGAAGCGCTCGGCTTCATATCGAACCGCAGGCTCCAGGTGGCCGGTCTCCTCGCGGAACGGGAAGGCAGGACTTCTCCCTCCTGGCTTTCGTCCCCTATAAAAATCTACACGGACTCCCAATATGTGAAAAACGGCGTCCAGACATGGCTGCGCGGGTGGAAGGCCAAGGGCTGGAAGACGGCCGACAAGAAACCAGTCAAGAATCAGGAGTTATGGATGGAGCTCGATATCCTCGTTCAGGAGCTGAAGCCTTCATTCTTCTGGGTCGAGGGGCATGCGGGCAATCCGGACAACGAGCGCTGCGATGCCCTCGTGCAGGAGAGAATCAAGGCGATGAGGAAATGA
PROTEIN sequence
Length: 184
MENRRLPAKPFSAIVAAMQEIIIHTDGGCSGNPGPGGWAYVMRYAERLREDSGWEPDTTNNRMELRAVIEALGFISNRRLQVAGLLAEREGRTSPSWLSSPIKIYTDSQYVKNGVQTWLRGWKAKGWKTADKKPVKNQELWMELDILVQELKPSFFWVEGHAGNPDNERCDALVQERIKAMRK*