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LAC_acetylene_scaffold_25361

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_25361_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1..522
DNA (522bp) protein (174aa)
Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=2538582 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_25361_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

519..1583
DNA (1065bp) protein (355aa)
FemAB family protein id=3718898 bin=GWB1_Spirochaetes_59_5 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
methicillin resistance protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_25361_3
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(1606..2157)
DNA (552bp) protein (184aa)
AMMECR1 domain protein id=1275931 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_25361_4
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2164..3015)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO67819.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
UPF0103/Mediator of ErbB2-driven cell motility-containing protein id=3404878 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
LAC_acetylene_scaffold_25361_5
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3081..4427
DNA (1347bp) protein (449aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0J5_SPICH
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEJ19339.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_25361_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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4427..5845
DNA (1419bp) protein (473aa)
MATE efflux family protein id=2915347 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
MATE efflux family protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_25361_7
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

5962..7647
DNA (1686bp) protein (562aa)
Gamma-glutamyltranspeptidase n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F757_9THEM
gamma-glutamyltranspeptidase
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:AFK07760.1}; Flags: Precursor;; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
LAC_acetylene_scaffold_25361_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7762..9033
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3L8Q8_9SPIO
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_25361_9
unknown

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9046..9195
DNA (150bp) protein (50aa)

This feature has no annotations

LAC_acetylene_scaffold_25361_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9205..10350
DNA (1146bp) protein (382aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJS8_FUSVA
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_25361_11
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..10949)
DNA (552bp) protein (184aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
Ribonuclease H n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AG29_9PROT
LAC_acetylene_scaffold_25361_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

11003..12769
DNA (1767bp) protein (589aa)
ABC-type multidrug/protein/lipid transport system, ATPase component id=2769044 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_25361_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

12772..13113
DNA (342bp) protein (114aa)
ABC-type multidrug/protein/lipid transport system, ATPase component id=2769047 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
multidrug ABC transporter ATPase
Tax=GWB1_Spirochaetes_59_5_curated
Displaying 13 items

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