ggKbase home page

LAC_acetylene_scaffold_12131

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_12131_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..624)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1T4_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK96513.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
LAC_acetylene_scaffold_12131_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(747..1487)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD118 RepID=R8QEG2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP69455.1}; TaxID=1053231 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD118.;"
Matrixin.
LAC_acetylene_scaffold_12131_3
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1517..2422)
DNA (906bp) protein (302aa)
rRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.51)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00035DB919
Tax=BJP_IG2102_Coriobacteriales_64_17
LAC_acetylene_scaffold_12131_4
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

2528..3022
DNA (495bp) protein (165aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism id=3155647 bin=GWA1_Treponema_62_8 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
thioesterase
Tax=BJP_IG2102_Coriobacteriales_64_17
LAC_acetylene_scaffold_12131_5
Aphanomyces astaci, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

comp(3593..4315)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCE4_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ETV72654.1}; TaxID=112090 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces astaci.;"
hypothetical protein
LAC_acetylene_scaffold_12131_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4457..5800)
DNA (1344bp) protein (448aa)
ATPase, AAA+ superfamily n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ83_9BACT
AAA ATPase
ATPase, AAA+ superfamily {ECO:0000313|EMBL:CBE67448.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
LAC_acetylene_scaffold_12131_7
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5956..6228)
DNA (273bp) protein (91aa)
prevent-host-death family protein id=14624137 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
prevent-host-death family protein
Tax=CG_Syntroph_02
LAC_acetylene_scaffold_12131_8
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6320..6610)
DNA (291bp) protein (97aa)
Probable transcriptional regulator n=1 Tax=Leptospirillum rubarum RepID=A3EUT8_9BACT
predicted transcriptional regulator
Tax=BJP_08E140C01_Coriobacteriales_62_12
LAC_acetylene_scaffold_12131_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6622..6885)
DNA (264bp) protein (88aa)
Transcriptional regulator, XRE family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JC37_9ALTE
XRE family plasmid maintenance system antidote protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
LAC_acetylene_scaffold_12131_10
unknown

Not on your lists

comp(6854..7381)
DNA (528bp) protein (176aa)

This feature has no annotations

LAC_acetylene_scaffold_12131_11
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7608..8450)
DNA (843bp) protein (281aa)
Putative signal transduction protein with Nacht domain n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZHV5_ANACC
putative signal transduction protein with Nacht domain
Putative signal transduction protein with Nacht domain {ECO:0000313|EMBL:AFZ58339.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
LAC_acetylene_scaffold_12131_12
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8557..8799)
DNA (243bp) protein (81aa)
id=3996910 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=BJP_IG2102_Coriobacteriales_64_17
LAC_acetylene_scaffold_12131_13
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8783..11119)
DNA (2337bp) protein (779aa)
Putative ATPase involved in DNA repair id=3996911 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
LAC_acetylene_scaffold_12131_14
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11384..11815)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHE8_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH39684.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
LAC_acetylene_scaffold_12131_15
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11903..15037)
DNA (3135bp) protein (1045aa)
Type I restriction endonuclease, HsdR family n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF14_GEOSK
type I restriction endonuclease, HsdR family
Type I site-specific deoxyribonuclease HsdR family protein {ECO:0000313|EMBL:AGK05348.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
LAC_acetylene_scaffold_12131_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15034..15699)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK44_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42756.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
LAC_acetylene_scaffold_12131_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15696..16937)
DNA (1242bp) protein (414aa)
Type I restriction-modification system specificity determinant n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9P9X9_XYLFA
type I restriction-modification system specificity determinant
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
LAC_acetylene_scaffold_12131_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16927..18474)
DNA (1548bp) protein (516aa)
hsdM; type I restriction-modification system DNA methylase (EC:2.1.1.72)
Type I restriction-modification system DNA methylase id=4359040 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
LAC_acetylene_scaffold_12131_19
unknown

Not on your lists

comp(18889..19701)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0003721CA1
LAC_acetylene_scaffold_12131_20
unknown

Not on your lists

19780..20274
DNA (495bp) protein (165aa)

This feature has no annotations

LAC_acetylene_scaffold_12131_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20414..22102
DNA (1689bp) protein (563aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ACI97767.1}; EC=1.17.4.2 {ECO:0000313|EMBL:ACI97767.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Anaerobic ribonucleoside triphosphate reductase n=2 Tax=Rhodospirillum rubrum RepID=G2TGN0_RHORU
Displaying 21 items

View Taxonomy