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LAC_acetylene_scaffold_10831

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Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_10831_1
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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640..2028
DNA (1389bp) protein (463aa)
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:KHS50912.1}; EC=4.1.1.33 {ECO:0000313|EMBL:KHS50912.1};; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
diphosphomevalonate decarboxylase n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0003080AEA
LAC_acetylene_scaffold_10831_2
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2021..3073
DNA (1053bp) protein (351aa)
Phosphomevalonate kinase n=1 Tax=Enterococcus faecalis 13-SD-W-01 RepID=S4DDH1_ENTFL
Phosphomevalonate kinase {ECO:0000313|EMBL:EEV33986.1}; TaxID=565653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EG2.;"
phosphomevalonate kinase
LAC_acetylene_scaffold_10831_3
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3070..4089
DNA (1020bp) protein (340aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Facklamia hominis CCUG 36813 RepID=K1LYE9_9LACT
idi; isopentenyl-diphosphate delta-isomerase
LAC_acetylene_scaffold_10831_4
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4132..4941
DNA (810bp) protein (270aa)
zinc transporter ZupT n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B329C
Zinc transporter ZupT {ECO:0000256|HAMAP-Rule:MF_00548, ECO:0000256|SAAS:SAAS00012146}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
zupT; Zinc transporter ZupT
LAC_acetylene_scaffold_10831_5
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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5180..6193
DNA (1014bp) protein (338aa)
Putative ribosome biogenesis GTPase RsgA id=2567061 bin=GWF2_Tenericutes_35_184 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
ribosome small subunit-dependent GTPase A
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
LAC_acetylene_scaffold_10831_6
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6231..7361)
DNA (1131bp) protein (377aa)
hydroxymethylglutaryl-CoA synthase n=1 Tax=Bacillus coagulans RepID=UPI0003758820
Bacillus coagulans strain HM-08, complete genome {ECO:0000313|EMBL:AJO24307.1}; TaxID=1398 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans.;"
hydroxymethylglutaryl-CoA synthase
LAC_acetylene_scaffold_10831_7
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7358..8410)
DNA (1053bp) protein (351aa)
Putative 3-hydroxy-3-methylglutaryl-CoA reductase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXN3_NOCFA
3-hydroxy-3-methylglutaryl-CoA reductase
Putative 3-hydroxy-3-methylglutaryl-CoA reductase {ECO:0000313|EMBL:BAD57058.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
LAC_acetylene_scaffold_10831_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8537..9409)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Treponema bryantii RepID=UPI0003B491C5
conserved hypothetical protein (DUF1814)
Tax=BJP_IG2157_Clostridiales_52_13
LAC_acetylene_scaffold_10831_9
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(9411..9938)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=2424802 bin=GWF1_Tenericute_35_14 species=Peptostreptococcus anaerobius genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
LAC_acetylene_scaffold_10831_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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10210..11658
DNA (1449bp) protein (483aa)
MATE efflux family protein id=4494696 bin=GWF2_Firmicute_57_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
norM; MATE efflux family protein NorM
Tax=BJP_IG2102_Acholeplasmatales_34_18
LAC_acetylene_scaffold_10831_11
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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11708..12355
DNA (648bp) protein (216aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase id=5024235 bin=GWA2_Tenericute_38_26 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Tax=GWE2_Tenericutes_38_8_curated
LAC_acetylene_scaffold_10831_12
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

12378..13400
DNA (1023bp) protein (341aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LZR5_9BACE
Tax=GWE2_Tenericutes_38_8_curated
LAC_acetylene_scaffold_10831_13
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

13425..14261
DNA (837bp) protein (279aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase id=3902573 bin=GWF2_Firmicute_57_13 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
Tax=BJP_IG2102_Acholeplasmatales_34_18
LAC_acetylene_scaffold_10831_14
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

14275..15045
DNA (771bp) protein (257aa)
kduD; 2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase id=3902575 bin=GWF2_Firmicute_57_13 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_10831_15
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

15181..15573
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=2426013 bin=GWF1_Tenericute_35_14 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
conserved membrane protein of unknown function
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_16
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

15574..17319
DNA (1746bp) protein (582aa)
EDD domain protein, DegV family id=4682921 bin=GWC2_Tenericute_34_14 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
degV family protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_17
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

17321..18118
DNA (798bp) protein (266aa)
Conserved integral membrane protein id=4682920 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
Steroid 5-alpha reductase domain protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_18
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists


18207..18356
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5V4X5_9FIRM
rpmG; 50S ribosomal protein L33
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_19
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

18442..19368
DNA (927bp) protein (309aa)
glcK; Glucokinase (EC:2.7.1.2)
Putative uncharacterized protein id=4045597 bin=GWF2_Firmicute_57_13 species=Roseburia inulinivorans genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_20
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

19371..20009
DNA (639bp) protein (213aa)
Uncharacterized protein id=4045595 bin=GWF2_Firmicute_57_13 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
beta-lactamase domain-containing protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_21
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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20115..21245
DNA (1131bp) protein (377aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO18492.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
PfkB domain protein id=4494680 bin=GWF2_Firmicute_57_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Firmicute_57_13 organism_group=Firmicute
LAC_acetylene_scaffold_10831_22
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(21303..22427)
DNA (1125bp) protein (375aa)
Citrate transporter id=4045587 bin=GWF2_Firmicute_57_13 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
putative spermidine/putrescine ABC transporter, substrate binding
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_10831_23
unknown

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22668..23096
DNA (429bp) protein (143aa)

This feature has no annotations

LAC_acetylene_scaffold_10831_24
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

23228..24241
DNA (1014bp) protein (338aa)
Heat-inducible transcription repressor hrcA id=4045581 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hrcA; Heat-inducible transcription repressor HrcA
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_25
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

24255..24860
DNA (606bp) protein (202aa)
Protein GrpE id=4045578 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
grpE; Protein GrpE (HSP-70 cofactor)
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_10831_26
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

24880..26709
DNA (1830bp) protein (610aa)
Chaperone protein DnaK id=4045576 bin=GWF2_Firmicute_57_13 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
dnaK; Chaperone protein DnaK
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_27
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

26765..27883
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ id=4045541 bin=GWF2_Firmicute_57_13 species=Facklamia languida genus=Facklamia taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
dnaJ; Chaperone protein DnaJ
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_10831_28
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

28037..28390
DNA (354bp) protein (118aa)
PadR family transcriptional regulator id=4135588 bin=GWF2_Firmicute_57_13 species=unknown genus=Leuconostoc taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
PadR-like transcriptional regulator
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_10831_29
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

28403..29818
DNA (1416bp) protein (472aa)
Putative uncharacterized protein id=4135589 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_10831_30
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

29799..30404
DNA (606bp) protein (202aa)
Putative uncharacterized protein id=4135590 bin=GWF2_Firmicute_57_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
Displaying items 1-30 of 101 in total

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