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LAC_acetylene_scaffold_30452

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_30452_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1787)
DNA (1785bp) protein (595aa)
pck; Pck (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VR03_CLOSH
LAC_acetylene_scaffold_30452_2
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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1965..2786
DNA (822bp) protein (274aa)
FeS assembly ATPase SufC id=4503912 bin=GWF2_Firmicute_57_13 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
yurY; Vegetative protein 296
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_3
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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2783..3733
DNA (951bp) protein (317aa)
FeS assembly protein SufD id=4503908 bin=GWF2_Firmicute_57_13 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
sufD; Iron-sulfur cluster assembly SUF system SufD
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_4
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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3717..4922
DNA (1206bp) protein (402aa)
csd; putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=4503905 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_5
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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4931..5362
DNA (432bp) protein (144aa)
SUF system FeS assembly protein, NifU family id=4503902 bin=GWF2_Firmicute_57_13 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
nifU; NifU-like protein
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_6
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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5367..6779
DNA (1413bp) protein (471aa)
SUF system FeS cluster assembly protein id=4503899 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
sufB; FeS cluster assembly protein SufB
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_7
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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6893..7216
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=4503896 bin=GWF2_Firmicute_57_13 species=Solobacterium moorei genus=Solobacterium taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
conserved hypothetical protein, contains nitrogen regulatory PII-like domain
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_8
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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7359..10025
DNA (2667bp) protein (889aa)
Laminaribiose phosphorylase id=4503893 bin=GWF2_Firmicute_57_13 species=Halanaerobium saccharolyticum genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
cellobiose phosphorylase
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_9
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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10025..10762
DNA (738bp) protein (246aa)
Glycoside hydrolase family 16 id=4503890 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
glycoside hydrolase family 16
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_10
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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10873..12207
DNA (1335bp) protein (445aa)
Glycoside hydrolase id=4503887 bin=GWF2_Firmicute_57_13 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
glucosylceramidase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_11
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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12204..13208
DNA (1005bp) protein (335aa)
Putative glucan 1,3-beta-glucosidase id=4503884 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Glycoside hydrolase, family 5
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_12
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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13205..14782
DNA (1578bp) protein (526aa)
Glucan endo-1,6-beta-glucosidase id=4503880 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
glycosyl hydrolase family 30 protein
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_13
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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14784..16754
DNA (1971bp) protein (657aa)
Beta-N-acetylhexosaminidase id=4503874 bin=GWF2_Firmicute_57_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
beta-glucosidase-like glycosyl hydrolase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_14
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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16755..18956
DNA (2202bp) protein (734aa)
beta-glucosidase-related glycosidase (EC:3.2.1.21)
Putative beta-glucosidase id=4503871 bin=GWF2_Firmicute_57_13 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_15
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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19048..20799
DNA (1752bp) protein (584aa)
Putative uncharacterized protein id=4503868 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_16
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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20955..23948
DNA (2994bp) protein (998aa)
ABC transporter substrate-binding protein id=4503865 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter substrate-binding protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_17
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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23950..24930
DNA (981bp) protein (327aa)
binding-protein-dependent transport systems inner membrane component id=4503855 bin=GWF2_Firmicute_57_13 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter, permease component
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_18
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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24940..25812
DNA (873bp) protein (291aa)
ABC transporter permease id=4503853 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter permease
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_19
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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25823..27877
DNA (2055bp) protein (685aa)
Integral membrane protein id=4503851 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein, DUF1282
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_20
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

27864..30344
DNA (2481bp) protein (827aa)
ABC transporter substrate-binding protein id=4503849 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_21
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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30346..31326
DNA (981bp) protein (327aa)
ABC transporter permease id=4503846 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter, permease component
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_22
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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31323..32327
DNA (1005bp) protein (335aa)
ABC transporter permease id=4503844 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter, permease component
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_23
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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32331..33278
DNA (948bp) protein (316aa)
Glucan endo-13-beta-D-glucosidase protein {ECO:0000313|EMBL:ERJ11597.1}; EC=3.2.1.39 {ECO:0000313|EMBL:ERJ11597.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
Glucan endo-13-beta-D-glucosidase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2DSX5_9BACT
Concanavalin A-like lectin/glucanases superfamily protein
LAC_acetylene_scaffold_30452_24
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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33342..34016
DNA (675bp) protein (225aa)
Putative uncharacterized protein id=4503842 bin=GWF2_Firmicute_57_13 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_25
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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34029..34691
DNA (663bp) protein (221aa)
Putative uncharacterized protein id=4503840 bin=GWF2_Firmicute_57_13 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
LAC_acetylene_scaffold_30452_26
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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34691..35245
DNA (555bp) protein (185aa)
Uncharacterized protein id=4503838 bin=GWF2_Firmicute_57_13 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
carbohydrate diacid transcriptional activator CdaR
Tax=GWF2_Tenericutes_57_13_curated
LAC_acetylene_scaffold_30452_27
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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35321..36457
DNA (1137bp) protein (379aa)
ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC (EC:3.6.3.20)
Sugar ABC transporter ATPase id=4503836 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
Displaying 27 items

View Taxonomy