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LAC_acetylene_scaffold_11838

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_11838_1

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70..1050
DNA (981bp) protein (327aa)
diguanylate cyclase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AADA9
Marine sediment metagenome DNA, contig: S01H1_L01845 {ECO:0000313|EMBL:GAF85147.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotate dehydrogenase 2
LAC_acetylene_scaffold_11838_2
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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1191..1688
DNA (498bp) protein (166aa)
Multisubunit Na+/H+ antiporter, MnhE subunit n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UEX6_FERPD
multisubunit Na+/H+ antiporter subunit MnhE
Tax=BJP_08E140C01_Bacteriodales_41_10
LAC_acetylene_scaffold_11838_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1685..1936
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000372D052
mnhF; monovalent cation/H+ antiporter subunit F
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1933..2334
DNA (402bp) protein (134aa)
Na+/H+ antiporter subunit n=1 Tax=uncultured organism RepID=M1Q1S7_9ZZZZ
putative monovalent cation/H+ antiporter subunit G
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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2336..3373
DNA (1038bp) protein (346aa)
Na+/H+ antiporter MnhB subunit-related protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJM3_PETMO
putative monovalent cation/H+ antiporter subunit B
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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3370..3741
DNA (372bp) protein (124aa)
NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHR0_KOSOT
NADH-ubiquinone oxidoreductase chain 4L
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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3735..5201
DNA (1467bp) protein (489aa)
Na(+)/H(+) antiporter subunit D n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GIE9_CALEA
mrpD; Na(+)/H(+) antiporter subunit D
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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5214..7097
DNA (1884bp) protein (628aa)
NADH dehydrogenase (Quinone) n=1 Tax=Thiocapsa marina 5811 RepID=F9U9Z5_9GAMM
mrpD; putative Na(+)/H(+) antiporter subunit D
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7094..8002
DNA (909bp) protein (303aa)
Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Beggiatoa sp. PS RepID=A7C247_9GAMM
NADH dehydrogenase {ECO:0000313|EMBL:KHD05018.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
NuoH-like protein
LAC_acetylene_scaffold_11838_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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8017..8604
DNA (588bp) protein (196aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHQ6_KOSOT
NADH dehydrogenase subunit B
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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8601..9344
DNA (744bp) protein (248aa)
NADH-ubiquinone oxidoreductase chain C n=2 Tax=sulfur-oxidizing symbionts RepID=G2DEW7_9GAMM
NADH dehydrogenase (ubiquinone) 30 kDa subunit
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11838_12
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9337..10506
DNA (1170bp) protein (390aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J7U8_9GAMM
NADH-quinone oxidoreductase subunit D {ECO:0000313|EMBL:ESQ10519.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
LAC_acetylene_scaffold_11838_13
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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10519..12798
DNA (2280bp) protein (760aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHQ3_KOSOT
oxidoreductase
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACR80729.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
LAC_acetylene_scaffold_11838_14
unknown

Not on your lists

comp(12800..13384)
DNA (585bp) protein (195aa)

This feature has no annotations

LAC_acetylene_scaffold_11838_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(13387..13713)
DNA (327bp) protein (109aa)
Trp repressor id=3765246 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
transcription factor/trp operon repressor
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_11838_16
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13849..15198)
DNA (1350bp) protein (450aa)
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Phosphoglycerate kinase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QZ20_SPHPG
3-phosphoglycerate kinase
LAC_acetylene_scaffold_11838_17
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(15286..16323)
DNA (1038bp) protein (346aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AEC01328.1}; EC=1.2.1.12 {ECO:0000313|EMBL:AEC01328.1};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJ33_SPICD
glyceraldehyde-3-phosphate dehydrogenase
LAC_acetylene_scaffold_11838_18
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(16336..17223)
DNA (888bp) protein (296aa)
inosose dehydratase n=1 Tax=Treponema primitia RepID=UPI0002554F04
Myo-inositol catabolism protein IolE
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(17350..19215)
DNA (1866bp) protein (622aa)
putative malonic semialdehyde oxidative decarboxylase (EC:1.-.-.-)
Probable malonic semialdehyde oxidative decarboxylase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YMA5_TREPZ
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(19303..20187)
DNA (885bp) protein (295aa)
myo-inositol catabolism protein LolB n=1 Tax=Treponema primitia RepID=UPI0002554F02
myo-inositol catabolism protein
Tax=RBG_16_Spirochaete_67_19_curated
LAC_acetylene_scaffold_11838_21
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(20195..21214)
DNA (1020bp) protein (340aa)
inositol 2-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase id=3525081 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_22
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(21241..22080)
DNA (840bp) protein (280aa)
Xylose isomerase domain protein TIM barrel id=3493718 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
xylose isomerase domain-containing protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_23
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(22146..23129)
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AGX1_SEBTE
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACZ10841.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
LAC_acetylene_scaffold_11838_24
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23141..24661)
DNA (1521bp) protein (507aa)
ABC transporter related protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AGX2_SEBTE
ABC transporter
Tax=BJP_IG2157_Clostridiales_35_16
LAC_acetylene_scaffold_11838_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(24738..25667)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000360F681
periplasmic binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADK80247.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
LAC_acetylene_scaffold_11838_26
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25744..26763)
DNA (1020bp) protein (340aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Oribacterium sinus F0268 RepID=C2L150_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEJ50278.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
oxidoreductase domain-containing protein
LAC_acetylene_scaffold_11838_27
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(27008..28213)
DNA (1206bp) protein (402aa)
Major facilitator superfamily MFS_1 id=4017600 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_28
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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28383..29390
DNA (1008bp) protein (336aa)
Alanine racemase id=3493779 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
transcriptional regulator
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11838_29
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(29526..30020)
DNA (495bp) protein (165aa)
Rubrerythrin family protein id=3503377 bin=GWB1_Spirochaetes_59_5 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
rubrerythrin family protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_11838_30
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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30195..31106
DNA (912bp) protein (304aa)
adhesion protein id=3503201 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC-type metal ion transport system, periplasmic component/surface adhesin
Tax=BJP_08E140C01_Spirochaeta_53_29
Displaying items 1-30 of 62 in total

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