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LAC_acetylene_scaffold_3585

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_3585_1
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

305..748
DNA (444bp) protein (148aa)
Protein MraZ n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1Y5_SPICH
protein mraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_3585_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

758..1768
DNA (1011bp) protein (337aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1Y4_SPICH
ribosomal RNA small subunit methyltransferase H
LAC_acetylene_scaffold_3585_3
unknown

Not on your lists

1765..2070
DNA (306bp) protein (102aa)

This feature has no annotations

LAC_acetylene_scaffold_3585_4
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2057..3529
DNA (1473bp) protein (491aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y8X7_TREAZ
LAC_acetylene_scaffold_3585_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

3519..4601
DNA (1083bp) protein (361aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3173643 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_6
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

4614..5783
DNA (1170bp) protein (390aa)
Stage V sporulation protein E id=3173644 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
ftsW; cell division protein FtsW
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

5776..6963
DNA (1188bp) protein (396aa)
cell division protein id=1297431 bin=GWE1_Spirochaete_60_18 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
polypeptide-transport-associated domain-containing protein FtsQ-type
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

6908..8194
DNA (1287bp) protein (429aa)
Cell division protein ftsA id=3131202 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
cell division protein FtsA
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

8216..9463
DNA (1248bp) protein (416aa)
Cell division protein FtsZ id=1297433 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
cell division protein FtsZ
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_3585_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9460..10338
DNA (879bp) protein (293aa)
Tyrosine recombinase XerC id=3131192 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
tyrosine recombinase XerD
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_3585_11
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

10358..11425
DNA (1068bp) protein (356aa)
Smf protein id=3173656 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
DNA processing protein DprA
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_12
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11440..13578
DNA (2139bp) protein (713aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
DNA topoisomerase 1 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1X3_SPICH
LAC_acetylene_scaffold_3585_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13582..14478
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC id=3131063 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
xerC; tyrosine recombinase XerC
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3585_14
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14498..15088
DNA (591bp) protein (197aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
ATP-dependent protease subunit HslV n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1X1_SPICH
ATP-dependent protease hslV
LAC_acetylene_scaffold_3585_15
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

15088..16452
DNA (1365bp) protein (455aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UKW4_SPIAZ
ATP-dependent carboxylate-amine ligase
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_3585_16
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16474..17253
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UKT6_SPIAZ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
FliA/WhiG family RNA polymerase sigma factor
LAC_acetylene_scaffold_3585_17
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(17290..18672)
DNA (1383bp) protein (461aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZ61_SPICH
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3585_18
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(18673..19866)
DNA (1194bp) protein (398aa)
PAS/PAC sensor signal transduction histidine kinase id=1297475 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
PAS/PAC sensor signal transduction histidine kinase
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_3585_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(19850..21139)
DNA (1290bp) protein (430aa)
DNA polymerase III subunit gamma/tau id=2760462 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
DNA polymerase III domain-containing protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_3585_20
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(21142..21666)
DNA (525bp) protein (175aa)
Colicin V production protein id=2760461 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Colicin V production protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_3585_21
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(21672..22943)
DNA (1272bp) protein (424aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase id=3173967 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3585_22
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22940..24583)
DNA (1644bp) protein (548aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Glucose-6-phosphate isomerase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0H0_SPICH
glucose-6-phosphate isomerase
LAC_acetylene_scaffold_3585_23
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(24626..26299)
DNA (1674bp) protein (558aa)
ATP-dependent DNA helicase, RecQ family id=3748377 bin=GWB1_Spirochaetes_59_5 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RecQ familyATP-dependent DNA helicase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3585_24
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(26362..27096)
DNA (735bp) protein (245aa)
endonuclease III (EC:4.2.99.18)
Endonuclease III id=3748375 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3585_25
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27219..28160
DNA (942bp) protein (314aa)
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ornithine carbamoyltransferase, catabolic n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZ18_SPICH
LAC_acetylene_scaffold_3585_26
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28209..29198
DNA (990bp) protein (330aa)
DHH superfamily protein, subfamily 1 n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YPN1_TREPZ
DHH superfamily protein, subfamily 1
DHH superfamily protein, subfamily 1 {ECO:0000313|EMBL:AEF84741.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
LAC_acetylene_scaffold_3585_27
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

29598..30440
DNA (843bp) protein (281aa)
id=3748370 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_3585_28
Treponema sp. OMZ 838, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


30451..31056
DNA (606bp) protein (202aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1539298 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. OMZ 838.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Treponema medium ATCC 700293 RepID=S3KTC3_TREMD
purine NTP phosphatase
LAC_acetylene_scaffold_3585_29
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


comp(31190..31405)
DNA (216bp) protein (72aa)
50S ribosomal protein L31 id=3025198 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
50S ribosomal protein L31
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_3585_30
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(31508..33256)
DNA (1749bp) protein (583aa)
Transcription termination factor Rho id=3931381 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
transcription termination factor Rho
Tax=GWB1_Spirochaetes_60_80_curated
Displaying items 1-30 of 65 in total

View Taxonomy