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LAC_acetylene_scaffold_3915

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_3915_1

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comp(217..1545)
DNA (1329bp) protein (443aa)
Signal recognition particle protein {ECO:0000313|EMBL:CDL65443.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Signal recognition particle protein id=3427000 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
signal recognition particle protein
LAC_acetylene_scaffold_3915_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1567..2130)
DNA (564bp) protein (188aa)
Metal dependent phosphohydrolase id=3792410 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
metal dependent phosphohydrolase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_3915_3

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comp(2163..4037)
DNA (1875bp) protein (625aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CDL65441.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDL65441.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1N0_SPICH
LAC_acetylene_scaffold_3915_4

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comp(4043..4507)
DNA (465bp) protein (155aa)
Signal peptidase I {ECO:0000313|EMBL:CDL65440.1}; EC=3.4.21.89 {ECO:0000313|EMBL:CDL65440.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Signal peptidase I n=1 Tax=Treponema pedis str. T A4 RepID=S5ZXD4_9SPIO
signal peptidase I
LAC_acetylene_scaffold_3915_5

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4561..5973
DNA (1413bp) protein (471aa)
LysM domain/M23/M37 peptidase domain protein {ECO:0000313|EMBL:CDL65439.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Peptidase M23 id=2959304 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
peptigoglycan-binding protein LysM
LAC_acetylene_scaffold_3915_6
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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6125..7006
DNA (882bp) protein (294aa)
RNA polymerase sigma factor n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1F0_SPICH
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_3915_7

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7039..8112
DNA (1074bp) protein (358aa)
Divergent polysaccharide deacetylase family n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YMF8_TREPZ
Uncharacterised protein {ECO:0000313|EMBL:CDL65436.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
polysaccharide deacetylase family protein
LAC_acetylene_scaffold_3915_8

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8093..9112
DNA (1020bp) protein (340aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1F2_SPICH
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp {ECO:0000313|EMBL:CDL65435.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
LAC_acetylene_scaffold_3915_9

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9124..10251
DNA (1128bp) protein (376aa)
Putative leucyl aminopeptidase {ECO:0000313|EMBL:CDL65434.1}; EC=3.4.11.- {ECO:0000313|EMBL:CDL65434.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YD32_TREAZ
hypothetical protein
LAC_acetylene_scaffold_3915_10
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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10358..11944
DNA (1587bp) protein (529aa)
Lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Lysine--tRNA ligase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F4H4_SPICH
LAC_acetylene_scaffold_3915_11

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comp(12075..13889)
DNA (1815bp) protein (605aa)
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:CDL65429.1}; EC=3.4.24.- {ECO:0000313|EMBL:CDL65429.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
PepF/M3 family oligoendopeptidase n=1 Tax=Treponema denticola ATCC 33520 RepID=M2D8B7_TREDN
oligoendopeptidase, pepF/M3 family
LAC_acetylene_scaffold_3915_12
Treponema sp. OMZ 838, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13913..14362)
DNA (450bp) protein (150aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1539298 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. OMZ 838.;"
Nucleoside diphosphate kinase n=1 Tax=Treponema medium ATCC 700293 RepID=S3JUP7_TREMD
nucleoside diphosphate kinase
LAC_acetylene_scaffold_3915_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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14489..15532
DNA (1044bp) protein (348aa)
Uncharacterized protein id=2569307 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_3915_14
unknown

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15529..16581
DNA (1053bp) protein (351aa)

This feature has no annotations

LAC_acetylene_scaffold_3915_15

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comp(16558..18096)
DNA (1539bp) protein (513aa)
Alpha/beta hydrolase fold protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS07_9SPHI
Alpha/beta hydrolase {ECO:0000313|EMBL:CDL65427.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
hypothetical protein
LAC_acetylene_scaffold_3915_16

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comp(18093..18734)
DNA (642bp) protein (214aa)
Adenylate kinase {ECO:0000313|EMBL:CDL65426.1}; EC=2.7.4.3 {ECO:0000313|EMBL:CDL65426.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Adenylate kinase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXU3_SPICH
adenylate kinase
LAC_acetylene_scaffold_3915_17

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comp(18852..19787)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:CDL65425.1}; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Putative uncharacterized protein id=3955582 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
LAC_acetylene_scaffold_3915_18
unknown

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comp(19834..19947)
DNA (114bp) protein (38aa)

This feature has no annotations

LAC_acetylene_scaffold_3915_19

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20147..20689
DNA (543bp) protein (181aa)
NADH:ubiquinone oxidoreductase 24 kD subunit {ECO:0000313|EMBL:CDL65424.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CDL65424.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
NADH:ubiquinone oxidoreductase 24 kD subunit id=3637826 bin=GWA1_Treponema_62_8 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
NADH:ubiquinone oxidoreductase 24 kD subunit
LAC_acetylene_scaffold_3915_20

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20686..23880
DNA (3195bp) protein (1065aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:CDL65406.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDL65406.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit id=3977875 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
LAC_acetylene_scaffold_3915_21

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23894..25666
DNA (1773bp) protein (591aa)
Hydrogenase, Fe-only {ECO:0000313|EMBL:CDL65420.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CDL65420.1};; TaxID=527639 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="wastewater metagenome.;"
Hydrogenase, Fe-only id=3977874 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hydrogenase, Fe-only
LAC_acetylene_scaffold_3915_22
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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25767..26453
DNA (687bp) protein (229aa)
Putative hydrolase of the HAD superfamily n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPV4_SPITD
HAD superfamily hydrolase
Putative hydrolase of the HAD superfamily {ECO:0000313|EMBL:ADN02807.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
LAC_acetylene_scaffold_3915_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(26518..27306)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=uncultured Rhodobacterales bacterium HF0010_04M21 RepID=E0XQG3_9RHOB
metal dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
LAC_acetylene_scaffold_3915_24
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(27303..30872)
DNA (3570bp) protein (1190aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
DNA polymerase III, alpha subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXS9_SPICH
LAC_acetylene_scaffold_3915_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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30877..31665
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035F1ECC
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADK81165.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
LAC_acetylene_scaffold_3915_26
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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31662..32117
DNA (456bp) protein (152aa)
(2Fe-2S)-binding domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1M5_SPISS
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADK81166.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
LAC_acetylene_scaffold_3915_27
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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32110..34509
DNA (2400bp) protein (800aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2Y1_SPISS
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADK81167.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
LAC_acetylene_scaffold_3915_28
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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34506..35681
DNA (1176bp) protein (392aa)
XshC-Cox1-family protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7V402_9DELT
XshC-Cox1-family protein {ECO:0000313|EMBL:EPR41249.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
hypothetical protein
LAC_acetylene_scaffold_3915_29
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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35678..36385
DNA (708bp) protein (236aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. X2 RepID=S7V9U9_9DELT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EPR41248.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
hypothetical protein
LAC_acetylene_scaffold_3915_30
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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36447..37772
DNA (1326bp) protein (442aa)
Peptidase M20 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21DB6_RHOPB
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
Displaying items 1-30 of 46 in total

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