ggKbase home page

LAC_acetylene_scaffold_18662

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_18662_1
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(151..978)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037215FB
Cof-like hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:AEJ20880.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_18662_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1199..2869
DNA (1671bp) protein (557aa)
integral membrane protein MviN id=3976337 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_18662_trna_1
unknown

Not on your lists

2922..2994
DNA (73bp)
transferRNA Thr
LAC_acetylene_scaffold_18662_3
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


3058..3234
DNA (177bp) protein (59aa)
50S ribosomal protein L33 id=4015272 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
50S ribosomal protein L33
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_trna_2
unknown

Not on your lists

3242..3314
DNA (73bp)
transferRNA Trp
LAC_acetylene_scaffold_18662_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3385..3567
DNA (183bp) protein (61aa)
Protein translocase subunit SecE n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RCJ7_SPISS
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
LAC_acetylene_scaffold_18662_5
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3580..4137
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EX11_SPICH
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_18662_6
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


4308..4739
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K271_TREMA
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
50S ribosomal protein L11
LAC_acetylene_scaffold_18662_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


4741..5427
DNA (687bp) protein (229aa)
50S ribosomal protein L1 id=3014160 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
50S ribosomal protein L1
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


5432..5980
DNA (549bp) protein (183aa)
50S ribosomal protein L10 id=3014156 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
50S ribosomal protein L10
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


6145..6534
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 id=4015266 bin=GWB1_Spirochaetales_60_80 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
50S ribosomal protein L7/L12
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

6734..10228
DNA (3495bp) protein (1165aa)
DNA-directed RNA polymerase subunit beta id=3827770 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA-directed RNA polymerase subunit beta
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_18662_11
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

10316..14665
DNA (4350bp) protein (1450aa)
DNA-directed RNA polymerase subunit beta' id=4015264 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
DNA-directed RNA polymerase subunit beta'
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_12
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


14860..15234
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=2 Tax=Spirochaeta thermophila RepID=E0RQ77_SPITD
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
LAC_acetylene_scaffold_18662_13
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


15247..15717
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=4015262 bin=GWB1_Spirochaetales_60_80 species=unknown genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
30S ribosomal protein S7
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_14
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

15890..17995
DNA (2106bp) protein (702aa)
translation elongation factor G (EC:3.6.5.3)
Elongation factor G n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P940_DEFDS
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC; 101012 / SSM1).;"
LAC_acetylene_scaffold_18662_15
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

18273..19463
DNA (1191bp) protein (397aa)
Elongation factor Tu id=1287715 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
translation elongation factor Tu
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_16
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


19680..19985
DNA (306bp) protein (102aa)
30S ribosomal protein S10 id=1285221 bin=GWE1_Spirochaete_60_18 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
30S ribosomal protein S10
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


20065..20688
DNA (624bp) protein (208aa)
50S ribosomal protein L3 id=4069012 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
50S ribosomal protein L3
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_18662_18
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


20703..21350
DNA (648bp) protein (216aa)
50S ribosomal protein L4 id=2616799 bin=GWF1_Spirochaetes_60_12 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
50S ribosomal protein L4/L1e
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_19
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


21353..21637
DNA (285bp) protein (95aa)
50S ribosomal protein L23 id=3578751 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
rplW; 50S ribosomal protein L23
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_18662_20
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


21659..22489
DNA (831bp) protein (277aa)
50S ribosomal protein L2 id=4069009 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
50S ribosomal protein L2
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_21
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists


22507..22788
DNA (282bp) protein (94aa)
Ribosomal protein S19 id=2842561 bin=GWA1_Treponema_62_8 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
30S ribosomal protein S19
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_18662_22
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


22799..23167
DNA (369bp) protein (123aa)
50S ribosomal protein L22 n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YDV7_TREAZ
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
LAC_acetylene_scaffold_18662_23
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


23169..23999
DNA (831bp) protein (277aa)
30S ribosomal protein S3 n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KIC4_TRELE
rpsC; 30S ribosomal protein S3
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_24
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


24003..24419
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EX29_SPICH
50S ribosomal protein L16
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_25
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


24425..24631
DNA (207bp) protein (69aa)
50S ribosomal protein L29 id=3083814 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
50S ribosomal protein L29
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_26
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


24650..24922
DNA (273bp) protein (91aa)
30S ribosomal protein S17 id=3083815 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
30S ribosomal protein S17
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_27
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


24939..25307
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=3083816 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
rplN; 50S ribosomal protein L14
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_18662_28
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


25319..25639
DNA (321bp) protein (107aa)
50S ribosomal protein L24 id=3083817 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
50S ribosomal protein L24
Tax=GWB1_Spirochaetes_59_5_curated
Displaying items 1-30 of 53 in total

View Taxonomy