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LAC_acetylene_scaffold_5348

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_5348_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1..462
DNA (462bp) protein (154aa)
Putative Zn-dependent protease-like protein id=3787904 bin=GWB1_Spirochaetes_59_5 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative Zn-dependent protease
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_5348_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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462..1673
DNA (1212bp) protein (404aa)
Modulator of DNA gyrase family protein id=3787901 bin=GWB1_Spirochaetes_59_5 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
peptidase PmbA
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_5348_3
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1681..1914
DNA (234bp) protein (78aa)
TldD/PmbA family protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B3D7C5
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:EET86430.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
peptidase U62 modulator of DNA gyrase
LAC_acetylene_scaffold_5348_4
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(1958..3148)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase id=3438344 bin=GWB1_Spirochaetales_60_80 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_5348_5
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3354..3917)
DNA (564bp) protein (188aa)
transposase n=4 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000287D8DD
Transposase domain (DUF772) {ECO:0000313|EMBL:AFM41311.1}; Transposase, IS4 family {ECO:0000313|EMBL:AFM39155.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
Transposase domain (DUF772)
LAC_acetylene_scaffold_5348_6
unknown

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comp(4094..4252)
DNA (159bp) protein (53aa)

This feature has no annotations

LAC_acetylene_scaffold_5348_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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5093..5458
DNA (366bp) protein (122aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase id=3440059 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_5348_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5691..9368
DNA (3678bp) protein (1226aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
RNA helicase n=1 Tax=Treponema primitia RepID=UPI0002554CEF
DNA and RNA helicase
LAC_acetylene_scaffold_5348_9
unknown

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comp(9385..9561)
DNA (177bp) protein (59aa)

This feature has no annotations

LAC_acetylene_scaffold_5348_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(9799..10026)
DNA (228bp) protein (76aa)
Tryptophan synthase beta chain id=4843792 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
tryptophan synthase subunit beta
Tax=GWC2_Nitrospirae_57_13_curated
LAC_acetylene_scaffold_5348_11
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10072..10449)
DNA (378bp) protein (126aa)
Tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2A6_SPICH
Tax=BJP_IG2069_Spirochaetales_48_31
LAC_acetylene_scaffold_5348_12
unknown

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10494..10562
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 12 items

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