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LAC_acetylene_scaffold_26744

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_26744_1
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003685D32
zinc-binding protein
Tax=CG_Caldi_01
LAC_acetylene_scaffold_26744_2

Not on your lists

comp(415..1119)
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL49480.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
atm:ANT_15110 putative OmpR family two-component system response regulator id=1246685 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
two component transcriptional regulator
LAC_acetylene_scaffold_26744_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1085..2971)
DNA (1887bp) protein (629aa)
GAF sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
GAF sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC86_THET1
LAC_acetylene_scaffold_26744_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3114..3464)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Thermotoga RepID=B1LAN6_THESQ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
LAC_acetylene_scaffold_26744_5
unknown

Not on your lists

comp(3543..3710)
DNA (168bp) protein (56aa)

This feature has no annotations

LAC_acetylene_scaffold_26744_6
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3822..4844
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A625_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI57712.1}; Flags: Precursor;; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
LAC_acetylene_scaffold_26744_7
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

4882..6615
DNA (1734bp) protein (578aa)
Cna protein B-type domain n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCU7_DICT6
Cna protein B-type domain
Cna protein B-type domain {ECO:0000313|EMBL:ACI18564.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
LAC_acetylene_scaffold_26744_8
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6718..8580)
DNA (1863bp) protein (621aa)
Subtilisin-like serine protease n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTA1_SPHPG
subtilisin-like serine protease
Subtilisin-like serine protease {ECO:0000313|EMBL:AEV29068.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
LAC_acetylene_scaffold_26744_9
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8709..9593)
DNA (885bp) protein (295aa)
Ech-hydrogenase-related complex, small subunit n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9L4_GEOBB
ehrS; Ech-hydrogenase-like complex small subunit
Tax=RBG_13_Planctomycetes_60_9_curated
LAC_acetylene_scaffold_26744_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(9605..11116)
DNA (1512bp) protein (504aa)
NADH-ubiquinone oxidoreductase chain 49kDa id=3515032 bin=GWB1_Spirochaetales_60_80 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
ehrL-2; Ech-hydrogenase-related complex large subunit
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
LAC_acetylene_scaffold_26744_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11113..12729)
DNA (1617bp) protein (539aa)
Hydrogenase-4 component F (EC:1.-.-.-)
Hydrogenase, membrane subunit 1-like protein (EchA-like) id=3690073 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
LAC_acetylene_scaffold_26744_12
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(12740..13366)
DNA (627bp) protein (209aa)
NAD-dependent dehydrogenase subunit id=3690071 bin=GWA2_Elusimicrobia_69_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NAD-dependent dehydrogenase subunit
Tax=GWF1_Spirochaetes_49_6_curated
LAC_acetylene_scaffold_26744_13
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(13381..14301)
DNA (921bp) protein (307aa)
Respiratory-chain NADH dehydrogenase, subunit 1 id=4210794 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
respiratory-chain NADH dehydrogenase subunit 1
Tax=GWF1_Spirochaetes_49_6_curated
LAC_acetylene_scaffold_26744_14
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(14298..16316)
DNA (2019bp) protein (673aa)
Hydrogenase-4 component B id=3829304 bin=GWF2_Planctomycete_41_51 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hyfB; protein HyfB
Tax=GWF1_Spirochaetes_49_6_curated
LAC_acetylene_scaffold_26744_15
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(16313..17059)
DNA (747bp) protein (249aa)
PTS IIA-like nitrogen-regulatory protein PtsN id=3829305 bin=GWF2_Planctomycete_41_51 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
excisionase family DNA-binding
Tax=GWF1_Spirochaetes_49_6_curated
LAC_acetylene_scaffold_26744_16
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17379..17870
DNA (492bp) protein (164aa)
Diverse 7TM receptor transmembrane region n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J362_CYCMS
hypothetical protein
Diverse 7TM receptor transmembrane region {ECO:0000313|EMBL:AEL28358.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
LAC_acetylene_scaffold_26744_17
unknown

Not on your lists

comp(17801..18070)
DNA (270bp) protein (90aa)

This feature has no annotations

LAC_acetylene_scaffold_26744_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18055..19026)
DNA (972bp) protein (324aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein id=3649000 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
oligopeptide/dipeptide ABC transporter ATP-binding protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_26744_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(19019..19993)
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein id=3649002 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
oligopeptide/dipeptide ABC transporter ATP-binding protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_26744_20
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(19995..20972)
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=3649006 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_26744_21
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(20969..21949)
DNA (981bp) protein (327aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=2 Tax=Mesotoga RepID=I2F7K9_9THEM
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_26744_22
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(22080..23702)
DNA (1623bp) protein (541aa)
ABC-type dipeptide transport system, periplasmic component id=3649010 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
dipeptide ABC transporter substrate-binding protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_26744_23
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23770..25473)
DNA (1704bp) protein (568aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
Glycosyl hydrolase family 3 protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CRG9_9FIRM
glycoside hydrolase family protein
LAC_acetylene_scaffold_26744_24
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25541..26536
DNA (996bp) protein (332aa)
Acetyltransferase n=3 Tax=Clostridium acetobutylicum RepID=F0KDU7_CLOAE
Uncharacterized protein {ECO:0000313|EMBL:KGR77717.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
acetyltransferase
LAC_acetylene_scaffold_26744_25
unknown

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26925..27056
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 25 items

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