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LAC_acetylene_scaffold_30091_3

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: comp(1539..2417)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=3787897 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 289.0
  • Bit_score: 389
  • Evalue 2.80e-105
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 380
  • Evalue 2.90e-103
Tax=GWB1_Spirochaetes_59_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 289.0
  • Bit_score: 389
  • Evalue 4.00e-105

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Taxonomy

GWB1_Spirochaetes_59_5_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 879
ATGATGGAAAGAAAAAAAACCAAGGAAACACGATCCAGTGCGCAATTCGACGACGAGAACGTGTTGTCCATGTATCTCCGCGAGATCAACAGGATTCCTCTCCTATCCCGCGAAGAAGAAAATGAATATGCGACTCGCGCTGCTCTTGGCGACGAGCTGGCGAAAGCAATCCTTGCAAAGAGCAACCTTCGTTTTGTCGTCAATGTTGCCAAGAAGTACCAGAACCAAGGCCTGCCGCTCGCTGATCTCATCGCAGAGGGCAACATTGGCCTTCTGAACGCCATCGAACATTATGACGTCACCAAAGGTTATCATTTTATTTCCTATGCTGTGTGGTGGATCCGCCAGGCAATTCTCAAAGCCATCTGCGAAAAAAGCCGCATGATCCGCCTTCCGCTCAACAGAGCGAACGAACTTGTGCAGATCGAAAAAGCGCGCAATCTTTTTGAAGGCGAGCTATCGGAAGATGCAGAAATTCGCGAAGTAGCGGAATTCCTTGAAATGGAACCCGAGCATGTTAAAGACATTATCTCGATTTCCCGCGATTTGATTTCACTCGACGCGCCGGTATATGACGAAAAGAATTCGACCACTGTGGGCGAGCTCATTGAGAATGAGCATCATGAAAGCCCTGAACAGAACGCAATTCAGTCCAGCCTGCGCGAAGATATTAATAAGGTGCTCGCAGCTCTCACTGCAAAAGAGAGAGAGATTATCGAGTACCGATTCGGGTTGAACGGCAAACGCCCAATGAGCCTCAAAGAAATTGGCGATCGGATGCATCTGACAAAAGAAAGAATCCGTCAGATCGAGAAAGCGGCCCTCAAAAAGGTAGCCGTGCCCGAAACAATGGAAATTCTTCAGGCTTATATGGCCTGA
PROTEIN sequence
Length: 293
MMERKKTKETRSSAQFDDENVLSMYLREINRIPLLSREEENEYATRAALGDELAKAILAKSNLRFVVNVAKKYQNQGLPLADLIAEGNIGLLNAIEHYDVTKGYHFISYAVWWIRQAILKAICEKSRMIRLPLNRANELVQIEKARNLFEGELSEDAEIREVAEFLEMEPEHVKDIISISRDLISLDAPVYDEKNSTTVGELIENEHHESPEQNAIQSSLREDINKVLAALTAKEREIIEYRFGLNGKRPMSLKEIGDRMHLTKERIRQIEKAALKKVAVPETMEILQAYMA*