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LAC_acetylene_scaffold_30091

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_30091_1
unknown

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2..256
DNA (255bp) protein (85aa)
hypothetical protein
LAC_acetylene_scaffold_30091_2
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(374..1453)
DNA (1080bp) protein (360aa)
Polyprenyl synthetase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GCH9_SPITZ
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:AEJ62045.1}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
LAC_acetylene_scaffold_30091_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1539..2417)
DNA (879bp) protein (293aa)
RNA polymerase sigma factor id=3787897 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_30091_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2623..3291)
DNA (669bp) protein (223aa)
SEC-C motif domain protein id=3057626 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
SEC-C motif domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_30091_5
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3438..5636)
DNA (2199bp) protein (733aa)
glycogen debranching protein GlgX (EC:3.2.1.68)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Glycogen debranching enzyme GlgX n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2F1_SPICH
LAC_acetylene_scaffold_30091_6
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5633..6871)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermincola potens (strain JR) RepID=D5X8P0_THEPJ
3-oxoacyl-(acyl-carrier-protein) synthase 2
LAC_acetylene_scaffold_30091_7
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6874..7584)
DNA (711bp) protein (237aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ERT59627.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ERT59627.1};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
3-ketoacyl-ACP reductase n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000361511E
LAC_acetylene_scaffold_30091_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(7636..8571)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase id=1267205 bin=GWE1_Spirochaete_60_18 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
malonyl CoA-acyl carrier protein transacylase
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_30091_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(8620..9525)
DNA (906bp) protein (302aa)
Acetyltransferase, GNAT family id=3756980 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GCN5-like N-acetyltransferase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_30091_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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9636..10571
DNA (936bp) protein (312aa)
PHP domain protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYE5_SPICH
PHP domain-containing protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_30091_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10579..11160
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=4052613 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_30091_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(11157..12032)
DNA (876bp) protein (292aa)
GTPase Era id=2607122 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
GTP-binding protein Era-like-protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_30091_13
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12080..13606)
DNA (1527bp) protein (509aa)
3-dehydroquinate dehydratase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3S0_SPICH
3-dehydroquinate dehydratase
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00179162}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_30091_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13751..14392
DNA (642bp) protein (214aa)
DbpA RNA-binding domain protein id=4052679 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DbpA RNA-binding domain-containing protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_30091_15
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

14397..15104
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003651D13
beta-lactamase
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_30091_16
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15117..16172
DNA (1056bp) protein (352aa)
ApbE family lipoprotein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EWX7_SPICH
ApbE family lipoprotein
ApbE family protein {ECO:0000313|EMBL:AEF84867.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
LAC_acetylene_scaffold_30091_17
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(16315..17205)
DNA (891bp) protein (297aa)
Phosphoesterase PA-phosphatase related protein id=3532620 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
phosphoesterase PA-phosphatase-like protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_30091_trna_1
unknown

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17432..17514
DNA (83bp)
transferRNA Leu
LAC_acetylene_scaffold_30091_18
unknown

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17824..17904
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 19 items

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