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LAC_acetylene_scaffold_2108_1

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 2..1447

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4A9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 482.0
  • Bit_score: 440
  • Evalue 1.80e-120
Fis family NifA subfamily transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 405.0
  • Bit_score: 426
  • Evalue 7.50e-117
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:AEJ19792.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 405.0
  • Bit_score: 426
  • Evalue 3.70e-116

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Taxonomy

Treponema caldarium → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1446
TCCTTTTCGCGCGCGCTTTTGCGTTCCGACGAGCCGGGCATCGCAATCGGCGAGTACCTGAATGAGTTATCGCAGATTCTGCGCCCCTTGTCGTATGCTGCATGCGGCAGATCAACTCATCAGGAATCGCTGCGCTGCATTGTGCTTGGCGGCGATGAGCAGGTATATGGAAGCAATATTGCCGTTAGCGATGAGGTCCGGCTTGGCGCCGCTCCTTGCGGTTTTGCGCTCGAAGCGGATGAATGTATCCAAAAGAGAATCCGCGAAGGGATTGTAATCGAGGCCCCAGCAAAACAGAATGGCTCAACTGCTTTCGTGCTCAGCATGATGTTCAGTGCTGATGCGGCGCCAGAGCTTCTTTTATCCGCAAGTCAGGCGCTCCGCACTGCAGCCCAGCTCGTGGAAGAATATCTTTCCATGCGCGCCCGCCTTGCCGAAGAGATCGAACGCGACAGCGGCCGCCCGGTGGGGTCTGACCCCGTCTTAACCTGGTGCGGCATTGTCGGAAACTCGGATGTCATGCGCGAAGTATTCACCATGGTTGAACAAGTTGCGGGCACCGATGCCAGCGTGCTCCTTTTAGGGGAAAGCGGAACAGGCAAAGAGCTCGTGGCTCGTGCGATTCATCAAAAAAGCTCGCGAGCGAACAATCCATTTGTGGCAGTGAATTGCGCAGCATTGCCCGAATCGGTCATCGAAAGCGAGCTGTTCGGGCACGAAAAAGGCGCTTTTACCGGCGCCTTCGAACAGCGGAAAGGGCGCTTCGAACAAGCGAACGGGGGCACCCTCTTTTTGGACGAAATTGGCGAGCTCTCGCCTGGCTTGCAGGTCAAGCTGCTGCGATTTTTGCAAGATCACCGATTCGAGCGCGTTGGCGGCAATACCAGCATCGAAGCGAATGTCCGCGTCATCGCCGCAACAAACAGAAACCTTCAGGAATCAGTTGACCAGGGCGATTTCAGGCCTGATTTGTATTATCGGCTCAATGTGTTTCCGATCAACATTCCGCCACTCAGAGAGCGCGGCGCTGATATTCTCCTTCTCGCCGACCATTTCGTAGCAAAATTCAACAGGGAAAATACCAAAAAAATACAGCGCATATCGACCCCTGCGCTCGACCTTCTCATGATCTACCATTGGCCGGGCAATGTGCGCGAGCTCGAAAACTGCATTCTGCGCGCGGCTATTCTGTCCACTGATGGAGTAATTCATGCGTATCACCTGCCGCCAAGCTTGCAATCGGCAGCTTCCACAGGGACAGAGCCCTCAACCGGCCTCGACGCCGCTATCGCGCGCCTCGAAAAAGAACTCATCATAGAAGCGCTTAAGCTCGAAAATGGCAATGCGGCAGCAGCTGCGCGTAGGCTTGGCGCAACTGAGCGCCGGGTGCGCTACGCAATACAGCGCTACAGAATCGACGCAAGGCGATTTAAGACAAAATTGTAA
PROTEIN sequence
Length: 482
SFSRALLRSDEPGIAIGEYLNELSQILRPLSYAACGRSTHQESLRCIVLGGDEQVYGSNIAVSDEVRLGAAPCGFALEADECIQKRIREGIVIEAPAKQNGSTAFVLSMMFSADAAPELLLSASQALRTAAQLVEEYLSMRARLAEEIERDSGRPVGSDPVLTWCGIVGNSDVMREVFTMVEQVAGTDASVLLLGESGTGKELVARAIHQKSSRANNPFVAVNCAALPESVIESELFGHEKGAFTGAFEQRKGRFEQANGGTLFLDEIGELSPGLQVKLLRFLQDHRFERVGGNTSIEANVRVIAATNRNLQESVDQGDFRPDLYYRLNVFPINIPPLRERGADILLLADHFVAKFNRENTKKIQRISTPALDLLMIYHWPGNVRELENCILRAAILSTDGVIHAYHLPPSLQSAASTGTEPSTGLDAAIARLEKELIIEALKLENGNAAAAARRLGATERRVRYAIQRYRIDARRFKTKL*