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LAC_acetylene_scaffold_2108

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_2108_1
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2..1447
DNA (1446bp) protein (482aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4A9_9BACT
Fis family NifA subfamily transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:AEJ19792.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_2108_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1694..3847
DNA (2154bp) protein (718aa)
Glutamine synthetase catalytic region n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0T2_SPICH
glutamine synthetase catalytic region
Glutamine synthetase catalytic region {ECO:0000313|EMBL:AEJ19789.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_2108_3
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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3990..5480
DNA (1491bp) protein (497aa)
putatitive beta-lactamase n=1 Tax=Bacillus oceanisediminis RepID=UPI00030AFFC5
peptide ABC transporter
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_acetylene_scaffold_2108_4
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(5535..6245)
DNA (711bp) protein (237aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase id=3109807 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_2108_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6245..7024)
DNA (780bp) protein (260aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase id=3140522 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_2108_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7017..8099)
DNA (1083bp) protein (361aa)
ABC transporter permease id=3140524 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_2108_7
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8102..8995)
DNA (894bp) protein (298aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0C6_SPICH
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEJ18990.1}; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_2108_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9140..10291)
DNA (1152bp) protein (384aa)
extracellular ligand-binding receptor id=3140528 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
extracellular ligand-binding receptor
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_2108_9
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10823..10966
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXJ5_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19576.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_2108_10
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

11034..12071
DNA (1038bp) protein (346aa)
FAD dependent oxidoreductase id=2731191 bin=GWF1_Spirochaetes_60_12 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_2108_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12258..13019
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2N0_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19145.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_2108_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13078..13530
DNA (453bp) protein (151aa)
Putative uncharacterized protein id=2930267 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_2108_13
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13603..14847)
DNA (1245bp) protein (415aa)
Aspartate-ammonia ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0J4_9BACT
asparaginyl-tRNA synthetase
Tax=CG_Desulfarul_01
LAC_acetylene_scaffold_2108_14
unknown

Not on your lists

14878..15279
DNA (402bp) protein (134aa)

This feature has no annotations

LAC_acetylene_scaffold_2108_15
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15272..15826
DNA (555bp) protein (185aa)
BioY protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGZ8_DESAA
BioY protein
BioY protein {ECO:0000313|EMBL:ACL02086.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
LAC_acetylene_scaffold_2108_16
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15819..16565
DNA (747bp) protein (249aa)
cbiO3; cobalt import ATP-binding protein CbiO (EC:3.6.3.-)
Cobalt import ATP-binding protein CbiO {ECO:0000313|EMBL:AFV12296.1}; EC=3.6.3.- {ECO:0000313|EMBL:AFV12296.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
Cobalt import ATP-binding protein CbiO n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LH44_THEPS
LAC_acetylene_scaffold_2108_17
unknown

Not on your lists

16547..17374
DNA (828bp) protein (276aa)

This feature has no annotations

LAC_acetylene_scaffold_2108_18
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17432..19396)
DNA (1965bp) protein (655aa)
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EHE2_9SPIO
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:EIC02997.1}; Flags: Precursor;; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
adenylate/guanylate cyclase with Chase sensor
LAC_acetylene_scaffold_2108_19
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19396..20496)
DNA (1101bp) protein (367aa)
Peptidase, M48 family n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y8T4_TREAZ
peptidase, M48 family
Peptidase, M48 family {ECO:0000313|EMBL:AEF80667.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
LAC_acetylene_scaffold_2108_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(20498..20989)
DNA (492bp) protein (164aa)
SH3 domain-containing protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q5Q0_9DELT
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
LAC_acetylene_scaffold_2108_21
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(21179..21982)
DNA (804bp) protein (268aa)
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I id=2921655 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_2108_22
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21928..22626)
DNA (699bp) protein (233aa)
Exodeoxyribonuclease I (EC:3.1.11.1)
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC13873.1}; EC=3.1.11.1 {ECO:0000313|EMBL:AHC13873.1};; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
Exodeoxyribonuclease I n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WDH8_9SPIO
LAC_acetylene_scaffold_2108_23
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22636..23019)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GB25_SPITZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ61049.1}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
LAC_acetylene_scaffold_2108_24
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(23080..24348)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein id=4758975 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Spirochaetes_52_13_curated
LAC_acetylene_scaffold_2108_25
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24517..25128
DNA (612bp) protein (204aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KFO67769.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
NAD-dependent aldehyde dehydrogenase id=4746869 bin=GWC2_Elusimicrobia_64_44 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
NAD-dependent aldehyde dehydrogenase
Displaying 25 items

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