ggKbase home page

LAC_acetylene_scaffold_48741_9

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 13904..14836

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 313.0
  • Bit_score: 214
  • Evalue 2.20e-53
tRNA pseudouridine synthase B id=2427326 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 308.0
  • Bit_score: 230
  • Evalue 1.40e-57
Tax=GWB1_Spirochaetes_60_80_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 308.0
  • Bit_score: 230
  • Evalue 1.90e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_60_80_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 933
ATGTCTTGCAGCGGTTTTTTTCTCGTCGACAAGCCTGCCGGGCCGACTTCCAATAGAGTGCTTCAGGAAATCAAGCGAGCATTTAGCAAAGCCTACCCAACTCTGAATGTGAAATTCGGGCATGCGGGGACGCTTGATTCGTTCGCATCAGGACTGCTTATCGTGCTTACAGGCAAATGCACTCGTCTTACGCCATGGTTTATGCATCAAACCAAAGAATATGAAGCTGTTTTCCGTTTCGGAGAAGAAACAGACACGCTTGACCCGCTTGGCAGGATAATTGGGCATGCTGAGCTGCCAAGCAAAGATATGCTCGAACAAGCGATTCCTCGGTTTCAGGGAGATATTCTTCAGATTCCCCCGTCATACAGCGCAGTTCATATCGGCGGAAAAAGATCATACAAGATTGCGCGAGATGGCGAAACACCTGATCTTGCGCCTCGACCAGTTATGATCGAAGCTCTTAGGATGCATTCATATGACGGAGAAGAAGCCCATTTTAGCATTCGCTGTTCATCCGGCACATATATCCGCGCCCTTGCAAGAGATATTGCGCAGGCCTGTGGCTCTCGCGCTTTTGTAAAATCCCTGCGAAGAACGCGTATTGGTCCTTTTGCTGTCGATGCTGCGTTGCGTCCTGATATGTGTTCAGCCAAGACCATGATGCATTTTACATCCGAGGTTGCGATCTCACTGGGATTGGGCGCGGGATTGCTGAATCCAGCATATTTTGACCGCTTTCTGCACGGGTCGGATTTGCCTTTATCAGCGATCGAATCAAGAGGAAAAGCTTTGGACCTCTTTGCTGGAAGATCACTTGCAGATAGCCCTCTTGCTCTTTTTTCGCAGAGCGATGCATTTCTCGGCATTGTGCAGAAAAGCGAAAGCGGATGGGCTGTCAAGGTTATGGCAGCAGATGAGGCGAAAGAATGA
PROTEIN sequence
Length: 311
MSCSGFFLVDKPAGPTSNRVLQEIKRAFSKAYPTLNVKFGHAGTLDSFASGLLIVLTGKCTRLTPWFMHQTKEYEAVFRFGEETDTLDPLGRIIGHAELPSKDMLEQAIPRFQGDILQIPPSYSAVHIGGKRSYKIARDGETPDLAPRPVMIEALRMHSYDGEEAHFSIRCSSGTYIRALARDIAQACGSRAFVKSLRRTRIGPFAVDAALRPDMCSAKTMMHFTSEVAISLGLGAGLLNPAYFDRFLHGSDLPLSAIESRGKALDLFAGRSLADSPLALFSQSDAFLGIVQKSESGWAVKVMAADEAKE*