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LAC_acetylene_scaffold_48741

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_48741_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2..2365
DNA (2364bp) protein (788aa)
Putative uncharacterized protein id=3404345 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2384..4906
DNA (2523bp) protein (841aa)
Outer membrane protein assembly complex, YaeT protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2U9_SPICH
outer membrane protein assembly complex, YaeT protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

5056..7725
DNA (2670bp) protein (890aa)
DNA mismatch repair protein MutS id=2649706 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA mismatch repair protein MutS
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7748..8470
DNA (723bp) protein (241aa)
Putative uncharacterized protein id=2427336 bin=GWF1_Spirochaetes_60_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_5
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

8806..9276
DNA (471bp) protein (157aa)
Ribosome maturation factor RimP id=2967973 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
ribosome maturation factor RimP
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_48741_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9248..10702
DNA (1455bp) protein (485aa)
NusA antitermination factor id=2649717 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
NusA antitermination factor
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

10712..13582
DNA (2871bp) protein (957aa)
Translation initiation factor IF-2 id=2538872 bin=GWB1_Spirochaetales_60_80 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
translation initiation factor IF-2
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_48741_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13554..13904
DNA (351bp) protein (117aa)
Ribosome-binding factor A id=2649729 bin=GWB1_Spirochaetes_59_5 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ribosome-binding factor A
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_9
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

13904..14836
DNA (933bp) protein (311aa)
tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B id=2427326 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_48741_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

14833..15624
DNA (792bp) protein (264aa)
Putative riboflavin biosynthesis protein RibF id=2649736 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative riboflavin biosynthesis protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


15615..15884
DNA (270bp) protein (90aa)
30S ribosomal protein S15 id=2649741 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
30S ribosomal protein S15
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_12
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

15881..18133
DNA (2253bp) protein (751aa)
Polyribonucleotide nucleotidyltransferase id=2538739 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
polynucleotide phosphorylase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_13
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18179..19450
DNA (1272bp) protein (424aa)
Peptidase, M16 family n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACZ1_CARHZ
M16 family peptidase
Peptidase, M16 family {ECO:0000313|EMBL:ABB14903.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
LAC_acetylene_scaffold_48741_14
Prevotella multiformis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19443..19898
DNA (456bp) protein (152aa)
dut; dUTP diphosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=888743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multiformis DSM 16608.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F4H1_9BACT
LAC_acetylene_scaffold_48741_15
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

19852..21156
DNA (1305bp) protein (435aa)
Putative permease, YjgP/YjgQ family id=2427310 bin=GWF1_Spirochaetes_60_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
YjgP/YjgQ family permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_16
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

21153..22286
DNA (1134bp) protein (378aa)
putative permease, YjgP/YjgQ family protein id=3160781 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_48741_17
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22324..23466
DNA (1143bp) protein (381aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LM04_TREBD
LAC_acetylene_scaffold_48741_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(23547..26234)
DNA (2688bp) protein (896aa)
Transcription elongation factor id=3718979 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
transcription elongation factor GreA
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_48741_19
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(26245..27195)
DNA (951bp) protein (317aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3D6_SPICH
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEJ19512.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_48741_20
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

27360..28022
DNA (663bp) protein (221aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RZ00_SPHGB
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_21
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28086..28976
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WI03_9SPIO
hypothetical protein
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC15174.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
LAC_acetylene_scaffold_48741_22
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

28973..30022
DNA (1050bp) protein (350aa)
Putative uncharacterized protein id=3718926 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_48741_23
unknown

Not on your lists

30089..30199
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 23 items

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