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LAC_acetylene_scaffold_12071

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_12071_1
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(45..1241)
DNA (1197bp) protein (399aa)
Hypothetical similar to thiamin biosynthesis lipoprotein ApbE n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K5M6_9FIRM
Hypothetical similar to thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CDE71191.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
ApbE family lipoprotein
LAC_acetylene_scaffold_12071_2
unknown

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comp(1279..2004)
DNA (726bp) protein (242aa)

This feature has no annotations

LAC_acetylene_scaffold_12071_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2264..4591
DNA (2328bp) protein (776aa)
N-6 DNA methylase {ECO:0000313|EMBL:KJZ36649.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
N-6 DNA methylase id=3857571 bin=GWF2_Lentisphaerae_49_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
N-6 DNA methylase
LAC_acetylene_scaffold_12071_4
unknown

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4566..4706
DNA (141bp) protein (47aa)

This feature has no annotations

LAC_acetylene_scaffold_12071_5

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4699..5880
DNA (1182bp) protein (394aa)
Filamentation induced by cAMP protein Fic n=1 Tax=mine drainage metagenome RepID=T1BXU3_9ZZZZ
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EQD73478.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Fic family protein
LAC_acetylene_scaffold_12071_6
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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5877..7307
DNA (1431bp) protein (477aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036A9CDE
EcoKI restriction-modification system protein HsdS {ECO:0000313|EMBL:KFB71806.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
LAC_acetylene_scaffold_12071_7
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7376..8575
DNA (1200bp) protein (400aa)
Putative transcription regulator with HTH domain n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M386_GEODF
transcription regulator with HTH domain
Helix-turn-helix transcriptional regulator, XRE family, DUF955-containing {ECO:0000313|EMBL:ACM19496.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
LAC_acetylene_scaffold_12071_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8595..11033
DNA (2439bp) protein (813aa)
type I restriction-modification system restriction subunit (EC:3.1.21.3)
Type I restriction-modification system restriction subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PSV0_METMA
DEAD/DEAH box helicase {ECO:0000313|EMBL:KJZ36653.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Displaying 8 items

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