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LAC_acetylene_scaffold_11362

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_11362_1
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1..333)
-----------------
DNA (333bp)
protein (111aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031};; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Treponema medium ATCC 700293 RepID=S3K7U9_TREMD
ruvA; Holliday junction DNA helicase RuvA
LAC_acetylene_scaffold_11362_2
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(395..931)
-----------------
DNA (537bp)
protein (179aa)
Holliday junction resolvase RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
Holliday junction resolvase n=1 Tax=Treponema primitia RepID=UPI0002555708
LAC_acetylene_scaffold_11362_3
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(934..1668)
-----------------
DNA (735bp)
protein (245aa)
Probable transcriptional regulatory protein Spica_1339 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2U1_SPICH
hypothetical protein
Probable transcriptional regulatory protein Spica_1339 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_11362_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1738..4278)
-----------------
DNA (2541bp)
protein (847aa)
MutS2 protein id=2578543 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
MutS2 protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11362_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(4288..5328)
-----------------
DNA (1041bp)
protein (347aa)
Putative ribosome biogenesis GTPase RsgA id=2550422 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
ribosome biogenesis GTPase RsgA
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_11362_6
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(5335..6156)
-----------------
DNA (822bp)
protein (274aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=2550419 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_11362_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(6166..6462)
-----------------
DNA (297bp)
protein (99aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YIG2_TREPZ
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
LAC_acetylene_scaffold_11362_8
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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6561..7160
-----------------
DNA (600bp)
protein (200aa)
Pentapeptide repeat protein id=3200184 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
pentapeptide repeat-containing protein
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_11362_9
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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7157..7762
-----------------
DNA (606bp)
protein (202aa)
Metallo-beta-lactamase family protein id=1275996 bin=GWE1_Spirochaete_60_18 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
metallo-beta-lactamase
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_11362_10
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(7800..9137)
-----------------
DNA (1338bp)
protein (446aa)
L-fucose isomerase 2 domain protein id=4667218 bin=GWF2_Melioribacter_38_21 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
L-fucose isomerase-like protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
LAC_acetylene_scaffold_11362_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9171..10031)
-----------------
DNA (861bp)
protein (287aa)
Pyridoxamine kinase {ECO:0000256|HAMAP-Rule:MF_01639, ECO:0000256|SAAS:SAAS00011110}; Short=PM kinase {ECO:0000256|HAMAP-Rule:MF_01639};; EC=2.7.1.35 {ECO:0000256|HAMAP-Rule:MF_01639, ECO:0000256|SAAS:SAAS00088591};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Pyridoxamine kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9B6_AZOL4
pdxY; pyridoxal/pyridoxamine kinase
LAC_acetylene_scaffold_11362_12
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10028..11221)
-----------------
DNA (1194bp)
protein (398aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GE83_SPITZ
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEJ61436.1}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
Displaying 12 items

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