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LAC_acetylene_scaffold_11792

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_11792_1
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(31..1128)
DNA (1098bp) protein (366aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase id=4457266 bin=GWC2_Spirochaete_52_13 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
LAC_acetylene_scaffold_11792_2
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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comp(1151..3304)
DNA (2154bp) protein (718aa)
Multi-sensor signal transduction histidine kinase id=3017058 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
multi-sensor signal transduction histidine kinase
Tax=GWC2_Nitrospirae_42_7_curated
LAC_acetylene_scaffold_11792_3
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(3315..5315)
DNA (2001bp) protein (667aa)
transketolase (EC:2.2.1.1)
Transketolase id=3636846 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11792_4
unknown

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comp(5489..6115)
DNA (627bp) protein (209aa)

This feature has no annotations

LAC_acetylene_scaffold_11792_5
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6178..8040)
DNA (1863bp) protein (621aa)
UvrABC system protein C n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YCS3_TREAZ
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
LAC_acetylene_scaffold_11792_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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8057..8659
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EWN9_SPICH
NUDIX hydrolase
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_11792_7
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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8652..10112
DNA (1461bp) protein (487aa)
Pyruvate kinase id=1777599 bin=GWA2_Elusi-like_A8_64_40 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
pyruvate kinase
Tax=GWF2_Elusimicrobia_62_30_curated
LAC_acetylene_scaffold_11792_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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10109..10813
DNA (705bp) protein (235aa)
GTP cyclohydrolase id=24474969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11792_9
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10856..12001
DNA (1146bp) protein (382aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LIU7_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75765.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
LAC_acetylene_scaffold_11792_10
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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12011..12652
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=1305750 bin=GWE1_Spirochaete_60_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_acetylene_scaffold_11792_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(12678..13466)
DNA (789bp) protein (263aa)
Bacitracin ABC transporter permease n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X6E2_9BACL
ABC transporter permease
Tax=RBG_16_Spirochaete_67_19_curated
LAC_acetylene_scaffold_11792_12
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(13463..14380)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036D0AE8
bacitracin ABC transporter ATP-binding protein
Tax=BJP_08E140C01_Actinomycetales_70_11
LAC_acetylene_scaffold_11792_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(14377..15048)
DNA (672bp) protein (224aa)
Regulatory protein TetR id=2456122 bin=GWF1_Spirochaetes_51_8 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_11792_14
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(15213..17183)
DNA (1971bp) protein (657aa)
UPF0313 protein Spiaf_1788 id=3013927 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Radical SAM domain protein
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_11792_15
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(17248..18099)
DNA (852bp) protein (284aa)
Xylose isomerase domain-containing protein TIM barrel id=3923021 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
xylose isomerase domain-containing protein
Tax=GWC2_Spirochaetes_52_13_curated
LAC_acetylene_scaffold_11792_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

18232..18663
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=2518577 bin=GWB1_Spirochaetes_59_5 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Holliday junction resolvase-like protein
Tax=GWB1_Spirochaetes_59_5_curated
Displaying 16 items

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