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LAC_acetylene_scaffold_39193

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_39193_1
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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1..843
DNA (843bp) protein (281aa)
TatD-related deoxyribonuclease id=2487199 bin=GWB1_Spirochaetales_60_80 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
hydrolase TatD
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_39193_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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840..1595
DNA (756bp) protein (252aa)
UBA/THIF-type NAD/FAD binding protein id=3833924 bin=GWB1_Spirochaetes_59_5 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
UBA/THIF-type NAD/FAD binding protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
LAC_acetylene_scaffold_39193_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1614..2660)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=3979323 bin=GWB1_Spirochaetes_59_5 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_39193_4
unknown

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2687..3112
DNA (426bp) protein (142aa)

This feature has no annotations

LAC_acetylene_scaffold_39193_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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3200..4303
DNA (1104bp) protein (368aa)
Metal dependent phosphohydrolase id=4090129 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
HD domain-containing protein
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_39193_6
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(4285..5496)
DNA (1212bp) protein (404aa)
Metal dependent phosphohydrolase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CJ16_KOSOT
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACR79932.1}; Flags: Precursor;; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
LAC_acetylene_scaffold_39193_7
unknown

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comp(5532..5762)
DNA (231bp) protein (77aa)
Amidohydrolase subfamily id=2543731 bin=GWF1_Spirochaetes_60_12 species=Coprothermobacter proteolyticus genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
LAC_acetylene_scaffold_39193_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(5759..7159)
DNA (1401bp) protein (467aa)
Peptidase M24 id=2790383 bin=GWB1_Spirochaetes_59_5 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
peptidase M24
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_39193_9
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7274..7624
DNA (351bp) protein (117aa)
Transcriptional regulator, XRE family n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y9F5_TREAZ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEF82408.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
LAC_acetylene_scaffold_39193_10
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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comp(7646..9163)
DNA (1518bp) protein (506aa)
Na+/melibiose symporter-like transporter id=2816235 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
major facilitator superfamily protein
Tax=GWC2_Spirochaetes_52_13_curated
LAC_acetylene_scaffold_39193_11
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9182..10690
DNA (1509bp) protein (503aa)
Peptidase M16 domain protein id=2439648 bin=GWF1_Xanthomonadales_69_6 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEB15132.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
LAC_acetylene_scaffold_39193_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10715..12982)
DNA (2268bp) protein (756aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=2796683 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LAC_acetylene_scaffold_39193_13
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12997..13884)
DNA (888bp) protein (296aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
Release factor glutamine methyltransferase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GDV3_SPITZ
protein-(glutamine-N5) methyltransferase
LAC_acetylene_scaffold_39193_14
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13874..14905)
DNA (1032bp) protein (344aa)
Peptide chain release factor 1 n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YPJ1_TREPZ
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
LAC_acetylene_scaffold_39193_15
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15048..16322
DNA (1275bp) protein (425aa)
serS; serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
Serine--tRNA ligase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YHC7_TREPZ
Displaying 15 items

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