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LAC_acetylene_scaffold_39542_11

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(12103..13827)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2426997 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 578.0
  • Bit_score: 884
  • Evalue 3.20e-254
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 578.0
  • Bit_score: 822
  • Evalue 4.30e-236
Tax=GWB1_Spirochaetes_48_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 581.0
  • Bit_score: 897
  • Evalue 6.80e-258

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Taxonomy

GWB1_Spirochaetes_48_6_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1725
ATGAGTGATGTAGAACTCGACCCCGCCATCGCGAAGCTGCTGGAATACGCGAAAGAGAAAAAGTCGATCAGCTTCGACGAGCTCTCGGATTTCCTTCCGGAATCCGTCCTGAATTCGGAAAAGATAGACTCTATCCTCGCCCTGCTGGAGAGTAACAATATCCAGCTGGAAGAAGAGGATATCCAGATCGAGGACGAGCAGACGCTCAAGAAGGAACTGGAAAACAAGCGCCTCGTCAACAATTCGAAGGAATCGGGAAGCGACGATCCGATAAGGCTCTATCTCTACGAGATCGGGAAGGAACACCTCCTCACCGCGGACCAGGAAGTGGAACTCTCCAAGATGATGGAGGACGGCGAGGAAATCATCAAGGCGATACTCCGTAGATCCGGCATGCTCATACCCGAATTCTACCAGCTCACGGCCAAGGCCCTGCGCAAGGAAACGAAGGATTCGACCGGGCAGCGCAAGGAGAATACGGAGAAAATCGCGGAACGCAGGCGGCTGAACCAGTTCTACCGCGACGTCATACGCGACAGCCTCGCGGATCTCAGGGAATATGTCGACATCAAGAAGAAGATCCTCGCGAAGGGCGGGGATATCTTTACCGATGCCGACCTGGTGCTGAAGCGGGAAGCCCTCCTCGAAAAGATCAAGGATACGGAAATCCACCCCGAGGAAATCGGTTCCTTCTCTGAGAAATTCATCAACGCGGCCAAGAAGATCAACAAGTACAGGCGCGAACAGGACAGGATCCAGCGCATTCTCCAGATTTCTTCCATGCGGGATATCAGGATTCTCGGACGGAATCTTACGATAAAGGAAAAACGCGAGGCTATCGAGGAACAGCTGGGCCTGCCTTCCGAGGATATCAAGGAAAAAATCCGGCAGCTCCAGGTGACGGAGAAGAAACTCAAGGAACTCGAATCATCCTTCGAGGCCGATTGCGACCAGATCATCTCCATGGCAAGGGACATCAACCGCGGCAGGAAGATGATGAAGAGCGCCAAGGACAGGCTCATCAAGGCCAACCTCAGGCTCGTGGTCTCCATCGCCAAGAAATATACGAACAGGGGCCTGCACTTCTTCGACCTGGTCCAGGAAGGCAACATAGGGCTCATCAAGGCTGTCGAGAAGTTCGAATACAGGAAGGGTTACAAATTCTCCACCTATGCGACATGGTGGATACGGCAGGCGATAACCCGGTCCATTTCAGATCAGGCCAGGACCATCAGGGTTCCCGTCCACATGATTGAGCAGATCAACAAGGTCGTGAGGGAATCCCGCCAGCTGATGCAGAAGCTGGGACGCGAGCCTACGGACGACGAAATCGCCGAACAGCTCGGCTGGCCCGTATCCCGCGTCAAGAGCGTGAAGAACGTCGCCCGGGAACCCATCTCCCTCGAAACCCCGATAGGCGAGGACGAAGACTCCCTCCTGGGCGATTTCATCGAAGACAAGGAAATCGAGAATCCTTCGATTCAAACCGACTACAAGCTTCTCCAGGAGCAGATCAAGATGGTACTCTCCACGCTTCCGCCTCGCGAACAGGAAGTGCTGAGGATGAGATTCGGTCTGGATGACGGCTATTCCCTCACGCTCGAGGAAGTCGGGCTTTACTTCAACGTGACAAGGGAACGCATCCGCCAGATAGAGGCGAAAGCGCTGAAGAAACTGCGCCATTTCAAGCGGAGCCAGAAGCTTCGCGATTATATGGATCATTGA
PROTEIN sequence
Length: 575
MSDVELDPAIAKLLEYAKEKKSISFDELSDFLPESVLNSEKIDSILALLESNNIQLEEEDIQIEDEQTLKKELENKRLVNNSKESGSDDPIRLYLYEIGKEHLLTADQEVELSKMMEDGEEIIKAILRRSGMLIPEFYQLTAKALRKETKDSTGQRKENTEKIAERRRLNQFYRDVIRDSLADLREYVDIKKKILAKGGDIFTDADLVLKREALLEKIKDTEIHPEEIGSFSEKFINAAKKINKYRREQDRIQRILQISSMRDIRILGRNLTIKEKREAIEEQLGLPSEDIKEKIRQLQVTEKKLKELESSFEADCDQIISMARDINRGRKMMKSAKDRLIKANLRLVVSIAKKYTNRGLHFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVVRESRQLMQKLGREPTDDEIAEQLGWPVSRVKSVKNVAREPISLETPIGEDEDSLLGDFIEDKEIENPSIQTDYKLLQEQIKMVLSTLPPREQEVLRMRFGLDDGYSLTLEEVGLYFNVTRERIRQIEAKALKKLRHFKRSQKLRDYMDH*